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Draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats
Brackish cyanobacterial genome sequences are relatively rare. Here, we report the 5.5 Mbp, 5.8 Mbp and 6.1 Mbp draft genomes of Spirulina sp. CCY15215, Leptolyngbya sp. CCY15150 and Halomicronema sp. CCY15110 isolated from coastal microbial mats on the North Sea beach of the island of Schiermonnikoo...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Ivyspring International Publisher
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7893532/ https://www.ncbi.nlm.nih.gov/pubmed/33613774 http://dx.doi.org/10.7150/jgen.53678 |
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author | Boden, Joanne Sarah Grego, Michele Bolhuis, Henk Sánchez-Baracaldo, Patricia |
author_facet | Boden, Joanne Sarah Grego, Michele Bolhuis, Henk Sánchez-Baracaldo, Patricia |
author_sort | Boden, Joanne Sarah |
collection | PubMed |
description | Brackish cyanobacterial genome sequences are relatively rare. Here, we report the 5.5 Mbp, 5.8 Mbp and 6.1 Mbp draft genomes of Spirulina sp. CCY15215, Leptolyngbya sp. CCY15150 and Halomicronema sp. CCY15110 isolated from coastal microbial mats on the North Sea beach of the island of Schiermonnikoog in the Netherlands. Large scale phylogenomic analyses reveal that Spirulina sp. CCY15215 is a large cell diameter cyanobacterium, whereas Leptolyngbya sp. CCY15150 and Halomicronema sp. CCY15110 are the first reported brackish genomes belonging to the LPP clade consisting primarily of Leptolyngbya, Plectonema and Phormidium spp. Further genome mining divulges that all new draft genomes contain, ggpS and ggpP, the genes responsible for synthesising glucosylglycerol (GG), a compatible solute found in moderately salt-tolerant cyanobacteria. |
format | Online Article Text |
id | pubmed-7893532 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Ivyspring International Publisher |
record_format | MEDLINE/PubMed |
spelling | pubmed-78935322021-02-19 Draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats Boden, Joanne Sarah Grego, Michele Bolhuis, Henk Sánchez-Baracaldo, Patricia J Genomics Research Paper Brackish cyanobacterial genome sequences are relatively rare. Here, we report the 5.5 Mbp, 5.8 Mbp and 6.1 Mbp draft genomes of Spirulina sp. CCY15215, Leptolyngbya sp. CCY15150 and Halomicronema sp. CCY15110 isolated from coastal microbial mats on the North Sea beach of the island of Schiermonnikoog in the Netherlands. Large scale phylogenomic analyses reveal that Spirulina sp. CCY15215 is a large cell diameter cyanobacterium, whereas Leptolyngbya sp. CCY15150 and Halomicronema sp. CCY15110 are the first reported brackish genomes belonging to the LPP clade consisting primarily of Leptolyngbya, Plectonema and Phormidium spp. Further genome mining divulges that all new draft genomes contain, ggpS and ggpP, the genes responsible for synthesising glucosylglycerol (GG), a compatible solute found in moderately salt-tolerant cyanobacteria. Ivyspring International Publisher 2021-02-17 /pmc/articles/PMC7893532/ /pubmed/33613774 http://dx.doi.org/10.7150/jgen.53678 Text en © The author(s) This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions. |
spellingShingle | Research Paper Boden, Joanne Sarah Grego, Michele Bolhuis, Henk Sánchez-Baracaldo, Patricia Draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats |
title | Draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats |
title_full | Draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats |
title_fullStr | Draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats |
title_full_unstemmed | Draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats |
title_short | Draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats |
title_sort | draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7893532/ https://www.ncbi.nlm.nih.gov/pubmed/33613774 http://dx.doi.org/10.7150/jgen.53678 |
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