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Draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats

Brackish cyanobacterial genome sequences are relatively rare. Here, we report the 5.5 Mbp, 5.8 Mbp and 6.1 Mbp draft genomes of Spirulina sp. CCY15215, Leptolyngbya sp. CCY15150 and Halomicronema sp. CCY15110 isolated from coastal microbial mats on the North Sea beach of the island of Schiermonnikoo...

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Autores principales: Boden, Joanne Sarah, Grego, Michele, Bolhuis, Henk, Sánchez-Baracaldo, Patricia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7893532/
https://www.ncbi.nlm.nih.gov/pubmed/33613774
http://dx.doi.org/10.7150/jgen.53678
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author Boden, Joanne Sarah
Grego, Michele
Bolhuis, Henk
Sánchez-Baracaldo, Patricia
author_facet Boden, Joanne Sarah
Grego, Michele
Bolhuis, Henk
Sánchez-Baracaldo, Patricia
author_sort Boden, Joanne Sarah
collection PubMed
description Brackish cyanobacterial genome sequences are relatively rare. Here, we report the 5.5 Mbp, 5.8 Mbp and 6.1 Mbp draft genomes of Spirulina sp. CCY15215, Leptolyngbya sp. CCY15150 and Halomicronema sp. CCY15110 isolated from coastal microbial mats on the North Sea beach of the island of Schiermonnikoog in the Netherlands. Large scale phylogenomic analyses reveal that Spirulina sp. CCY15215 is a large cell diameter cyanobacterium, whereas Leptolyngbya sp. CCY15150 and Halomicronema sp. CCY15110 are the first reported brackish genomes belonging to the LPP clade consisting primarily of Leptolyngbya, Plectonema and Phormidium spp. Further genome mining divulges that all new draft genomes contain, ggpS and ggpP, the genes responsible for synthesising glucosylglycerol (GG), a compatible solute found in moderately salt-tolerant cyanobacteria.
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spelling pubmed-78935322021-02-19 Draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats Boden, Joanne Sarah Grego, Michele Bolhuis, Henk Sánchez-Baracaldo, Patricia J Genomics Research Paper Brackish cyanobacterial genome sequences are relatively rare. Here, we report the 5.5 Mbp, 5.8 Mbp and 6.1 Mbp draft genomes of Spirulina sp. CCY15215, Leptolyngbya sp. CCY15150 and Halomicronema sp. CCY15110 isolated from coastal microbial mats on the North Sea beach of the island of Schiermonnikoog in the Netherlands. Large scale phylogenomic analyses reveal that Spirulina sp. CCY15215 is a large cell diameter cyanobacterium, whereas Leptolyngbya sp. CCY15150 and Halomicronema sp. CCY15110 are the first reported brackish genomes belonging to the LPP clade consisting primarily of Leptolyngbya, Plectonema and Phormidium spp. Further genome mining divulges that all new draft genomes contain, ggpS and ggpP, the genes responsible for synthesising glucosylglycerol (GG), a compatible solute found in moderately salt-tolerant cyanobacteria. Ivyspring International Publisher 2021-02-17 /pmc/articles/PMC7893532/ /pubmed/33613774 http://dx.doi.org/10.7150/jgen.53678 Text en © The author(s) This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions.
spellingShingle Research Paper
Boden, Joanne Sarah
Grego, Michele
Bolhuis, Henk
Sánchez-Baracaldo, Patricia
Draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats
title Draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats
title_full Draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats
title_fullStr Draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats
title_full_unstemmed Draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats
title_short Draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats
title_sort draft genome sequences of three filamentous cyanobacteria isolated from brackish habitats
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7893532/
https://www.ncbi.nlm.nih.gov/pubmed/33613774
http://dx.doi.org/10.7150/jgen.53678
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