Cargando…

Grouping of genomic markers in populations with family structure

BACKGROUND: Linkage and linkage disequilibrium (LD) between genome regions cause dependencies among genomic markers. Due to family stratification in populations with non-random mating in livestock or crop, the standard measures of population LD such as [Formula: see text] may be biased. Grouping of...

Descripción completa

Detalles Bibliográficos
Autores principales:	Wittenburg, Dörte, Doschoris, Michael, Klosa, Jan
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2021
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7893918/ https://www.ncbi.nlm.nih.gov/pubmed/33607943 http://dx.doi.org/10.1186/s12859-021-04010-0

Ejemplares similares

Covariance Between Genotypic Effects and its Use for Genomic Inference in Half-Sib Families
por: Wittenburg, Dörte, et al.
Publicado: (2016)

Design of experiments for fine-mapping quantitative trait loci in livestock populations
por: Wittenburg, Dörte, et al.
Publicado: (2020)

Seagull: lasso, group lasso and sparse-group lasso regularization for linear regression models via proximal gradient descent
por: Klosa, Jan, et al.
Publicado: (2020)

Estimation of Recombination Rate and Maternal Linkage Disequilibrium in Half-Sibs
por: Hampel, Alexander, et al.
Publicado: (2018)

An ultra-high density SNP-based linkage map for enhancing the pikeperch (Sander lucioperca) genome assembly to chromosome-scale
por: de los Ríos-Pérez, Lidia, et al.
Publicado: (2020)

Including non-additive genetic effects in Bayesian methods for the prediction of genetic values based on genome-wide markers
por: Wittenburg, Dörte, et al.
Publicado: (2011)

Male recombination map of the autosomal genome in German Holstein
por: Qanbari, Saber, et al.
Publicado: (2020)

On Estimation of Genome Composition in Genetically Admixed Individuals Using Constrained Genomic Regression
por: Boerner, Vinzent, et al.
Publicado: (2018)

An approximate Bayesian significance test for genomic evaluations
por: Wittenburg, Dörte, et al.
Publicado: (2018)

Correction to: Male recombination map of the autosomal genome in German Holstein
por: Qanbari, Saber, et al.
Publicado: (2021)

Analysis of Autozygosity Using Whole-Genome Sequence Data of Full-Sib Families in Pikeperch (Sander lucioperca)
por: De los Ríos-Pérez, Lidia, et al.
Publicado: (2022)

Integrating Milk Metabolite Profile Information for the Prediction of Traditional Milk Traits Based on SNP Information for Holstein Cows
por: Melzer, Nina, et al.
Publicado: (2013)

Linear and generalized linear models for the detection of QTL effects on within-subject variability
por: Wittenburg, Dörte, et al.
Publicado: (2007)

CLARITY: a Shiny app for interactive visualisation of the bovine physical-genetic map
por: Melzer, Nina, et al.
Publicado: (2023)

Canadian polar bear population structure using genome‐wide markers
por: Jensen, Evelyn L., et al.
Publicado: (2020)

Genetic Contribution to Variation in Blood Calcium, Phosphorus, and Alkaline Phosphatase Activity in Pigs
por: Reyer, Henry, et al.
Publicado: (2019)

Cleaning and Conditioning of Contaminated Core Build-Up Material before Adhesive Bonding
por: Klosa, Karsten, et al.
Publicado: (2020)

Modelling the electric field in reactors yielding cold atmospheric–pressure plasma jets
por: Vafeas, P., et al.
Publicado: (2020)

Genetic diversity and population structure of Vernonia amygdalina Del. in Uganda based on genome wide markers
por: Nantongo, Judith S., et al.
Publicado: (2023)

The First Highly Contiguous Genome Assembly of Pikeperch (Sander lucioperca), an Emerging Aquaculture Species in Europe
por: Nguinkal, Julien Alban, et al.
Publicado: (2019)

Fine‐scale population structure of the northern hard clam (Mercenaria mercenaria) revealed by genome‐wide SNP markers
por: Ropp, Ann J., et al.
Publicado: (2023)

Development of microsatellite markers and assembly of the plastid genome in Cistanthe longiscapa (Montiaceae) based on low-coverage whole genome sequencing
por: Stoll, Alexandra, et al.
Publicado: (2017)

Comprehensive analyses of genetic diversities and population structure of the Guizhou Dong group based on 44 Y-markers
por: Zhang, Hongling, et al.
Publicado: (2023)

Optimising Genomic Selection in Wheat: Effect of Marker Density, Population Size and Population Structure on Prediction Accuracy
por: Norman, Adam, et al.
Publicado: (2018)

Association between family structure and food group intake in children
por: Baek, Youn Joo, et al.
Publicado: (2014)

Familial Identification: Population Structure and Relationship Distinguishability
por: Rohlfs, Rori V., et al.
Publicado: (2012)

Population Structure in Naegleria fowleri as Revealed by Microsatellite Markers
por: Coupat-Goutaland, Bénédicte, et al.
Publicado: (2016)

Genomic Structure and Evolution of Multigene Families: “Flowers” on the Human Genome
por: Kim, Hie Lim, et al.
Publicado: (2012)

Genome-based population structure analysis of the strawberry plant pathogen Xanthomonas fragariae reveals two distinct groups that evolved independently before its species description
por: Gétaz, Michael, et al.
Publicado: (2018)

Genome-Wide Informative Microsatellite Markers and Population Structure of Fusarium virguliforme from Argentina and the USA
por: da Silva, Leandro Lopes, et al.
Publicado: (2023)

Analysis of Genetic Diversity and Population Structure of Wild Strains and Cultivars Using Genomic SSR Markers in Lentinula edodes
por: Lee, Hwa-Yong, et al.
Publicado: (2020)

Genetic structure in four West African population groups
por: Adeyemo, Adebowale A, et al.
Publicado: (2005)

Genomic characterization of five deletions in the LDL receptor gene in Danish Familial Hypercholesterolemic subjects
por: Nissen, Peter H, et al.
Publicado: (2006)

Multilocus Sequence Typing of Aggregatibacter actinomycetemcomitans Competently Depicts the Population Structure of the Species
por: Nedergaard, Signe, et al.
Publicado: (2021)

Evolution of direct reciprocity in group-structured populations
por: Murase, Yohsuke, et al.
Publicado: (2022)

Population genetic structure analysis and forensic evaluation of Xinjiang Uigur ethnic group on genomic deletion and insertion polymorphisms
por: Mei, Ting, et al.
Publicado: (2016)

Whole-genome phylogenies of the family Bacillaceae and expansion of the sigma factor gene family in the Bacillus cereus species-group
por: Schmidt, Timothy R, et al.
Publicado: (2011)

Population structure analysis of Yeonsan Ogye using microsatellite markers
por: Cho, Sung Hyun, et al.
Publicado: (2020)

Genetic diversity and population structure of eddoe taro in China using genome-wide SNP markers
por: Wang, Zhixin, et al.
Publicado: (2020)

Characterizing the population structure and genetic diversity of maize breeding germplasm in Southwest China using genome-wide SNP markers
por: Zhang, Xiao, et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_6ectp7k60t8m3jj4d8b0f43eii