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Adapting to the Coronavirus Pandemic: Building and Incorporating a Diagnostic Pipeline in a Shared Resource Laboratory
In March 2020, with lockdown due to the coronavirus pandemic underway, the Francis Crick Institute (the Crick) regeared its research laboratories into clinical testing facilities. Two pipelines were established, one for polymerase chain reaction and the other for Serology. This article discusses the...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7894326/ https://www.ncbi.nlm.nih.gov/pubmed/33118310 http://dx.doi.org/10.1002/cyto.a.24248 |
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author | Russell, Emma Agua‐Doce, Ana Carr, Lotte Malla, Asha Bartolovic, Kerol Levi, Dina Henderson, Carl Das, Debipriya Rhys, Hefin Hobson, Philip Purewal, Sukhveer Riddell, Andrew |
author_facet | Russell, Emma Agua‐Doce, Ana Carr, Lotte Malla, Asha Bartolovic, Kerol Levi, Dina Henderson, Carl Das, Debipriya Rhys, Hefin Hobson, Philip Purewal, Sukhveer Riddell, Andrew |
author_sort | Russell, Emma |
collection | PubMed |
description | In March 2020, with lockdown due to the coronavirus pandemic underway, the Francis Crick Institute (the Crick) regeared its research laboratories into clinical testing facilities. Two pipelines were established, one for polymerase chain reaction and the other for Serology. This article discusses the Cricks Flow Cytometry Science Technology Platform (Flow STP) role in setting up the Serology pipeline. Pipeline here referring to the overarching processes in place to facilitate the receipt of human sera through to a SARs‐CoV‐2 enzyme‐linked immunosorbent assay result. We examine the challenges that had to be overcome by a research laboratory to incorporate clinical diagnostics and the processes by which this was achieved. It describes the governance required to run the service, the design of the standard operating procedures (SOPs) and pipeline, the setting up of the assay, the validation required to show the robustness of the pipeline and reporting the results of the assay. Finally, as the lockdown started to ease in June 2020, it examines how this new service affects the daily running of the Flow STP. © 2020 The Authors. Cytometry Part A published by Wiley Periodicals LLC on behalf of International Society for Advancement of Cytometry. |
format | Online Article Text |
id | pubmed-7894326 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-78943262021-03-02 Adapting to the Coronavirus Pandemic: Building and Incorporating a Diagnostic Pipeline in a Shared Resource Laboratory Russell, Emma Agua‐Doce, Ana Carr, Lotte Malla, Asha Bartolovic, Kerol Levi, Dina Henderson, Carl Das, Debipriya Rhys, Hefin Hobson, Philip Purewal, Sukhveer Riddell, Andrew Cytometry A SRL Communications In March 2020, with lockdown due to the coronavirus pandemic underway, the Francis Crick Institute (the Crick) regeared its research laboratories into clinical testing facilities. Two pipelines were established, one for polymerase chain reaction and the other for Serology. This article discusses the Cricks Flow Cytometry Science Technology Platform (Flow STP) role in setting up the Serology pipeline. Pipeline here referring to the overarching processes in place to facilitate the receipt of human sera through to a SARs‐CoV‐2 enzyme‐linked immunosorbent assay result. We examine the challenges that had to be overcome by a research laboratory to incorporate clinical diagnostics and the processes by which this was achieved. It describes the governance required to run the service, the design of the standard operating procedures (SOPs) and pipeline, the setting up of the assay, the validation required to show the robustness of the pipeline and reporting the results of the assay. Finally, as the lockdown started to ease in June 2020, it examines how this new service affects the daily running of the Flow STP. © 2020 The Authors. Cytometry Part A published by Wiley Periodicals LLC on behalf of International Society for Advancement of Cytometry. John Wiley & Sons, Inc. 2020-11-22 2021-01 /pmc/articles/PMC7894326/ /pubmed/33118310 http://dx.doi.org/10.1002/cyto.a.24248 Text en © 2020 The Authors. Cytometry Part A published by Wiley Periodicals LLC on behalf of International Society for Advancement of Cytometry. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | SRL Communications Russell, Emma Agua‐Doce, Ana Carr, Lotte Malla, Asha Bartolovic, Kerol Levi, Dina Henderson, Carl Das, Debipriya Rhys, Hefin Hobson, Philip Purewal, Sukhveer Riddell, Andrew Adapting to the Coronavirus Pandemic: Building and Incorporating a Diagnostic Pipeline in a Shared Resource Laboratory |
title | Adapting to the Coronavirus Pandemic: Building and Incorporating a Diagnostic Pipeline in a Shared Resource Laboratory |
title_full | Adapting to the Coronavirus Pandemic: Building and Incorporating a Diagnostic Pipeline in a Shared Resource Laboratory |
title_fullStr | Adapting to the Coronavirus Pandemic: Building and Incorporating a Diagnostic Pipeline in a Shared Resource Laboratory |
title_full_unstemmed | Adapting to the Coronavirus Pandemic: Building and Incorporating a Diagnostic Pipeline in a Shared Resource Laboratory |
title_short | Adapting to the Coronavirus Pandemic: Building and Incorporating a Diagnostic Pipeline in a Shared Resource Laboratory |
title_sort | adapting to the coronavirus pandemic: building and incorporating a diagnostic pipeline in a shared resource laboratory |
topic | SRL Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7894326/ https://www.ncbi.nlm.nih.gov/pubmed/33118310 http://dx.doi.org/10.1002/cyto.a.24248 |
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