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Short tandem repeat profiling for the authentication of cancer stem‐like cells

Colorectal and glioblastoma cancer stem‐like cells (CSCs) are essential for translational research. Cell line authentication by short tandem repeat (STR) profiling ensures reproducibility of results in oncology research. This technique enables to identify mislabeling or cross‐contamination of cell l...

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Autores principales: Visconti, Paola, Parodi, Federica, Parodi, Barbara, Casarino, Lucia, Romano, Paolo, Buccarelli, Mariachiara, Pallini, Roberto, D'Alessandris, Quintino Giorgio, Montori, Andrea, Pilozzi, Emanuela, Ricci‐Vitiani, Lucia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7894552/
https://www.ncbi.nlm.nih.gov/pubmed/33128777
http://dx.doi.org/10.1002/ijc.33370
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author Visconti, Paola
Parodi, Federica
Parodi, Barbara
Casarino, Lucia
Romano, Paolo
Buccarelli, Mariachiara
Pallini, Roberto
D'Alessandris, Quintino Giorgio
Montori, Andrea
Pilozzi, Emanuela
Ricci‐Vitiani, Lucia
author_facet Visconti, Paola
Parodi, Federica
Parodi, Barbara
Casarino, Lucia
Romano, Paolo
Buccarelli, Mariachiara
Pallini, Roberto
D'Alessandris, Quintino Giorgio
Montori, Andrea
Pilozzi, Emanuela
Ricci‐Vitiani, Lucia
author_sort Visconti, Paola
collection PubMed
description Colorectal and glioblastoma cancer stem‐like cells (CSCs) are essential for translational research. Cell line authentication by short tandem repeat (STR) profiling ensures reproducibility of results in oncology research. This technique enables to identify mislabeling or cross‐contamination of cell lines. In our study, we provide a reference dataset for a panel of colorectal and glioblastoma CSCs that allows authentication. Each cell line was entered into the cell Line Integrated Molecular Authentication database 2.1 to be compared to the STR profiles of 4485 tumor cell lines. This article also provides clinical data of patients from whom CSCs arose and data on the parent tumor stage and mutations. STR profiles and information of our CSCs are also available in the Cellosaurus database (ExPASy) as identified by unique research resource identifier codes.
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spelling pubmed-78945522021-03-02 Short tandem repeat profiling for the authentication of cancer stem‐like cells Visconti, Paola Parodi, Federica Parodi, Barbara Casarino, Lucia Romano, Paolo Buccarelli, Mariachiara Pallini, Roberto D'Alessandris, Quintino Giorgio Montori, Andrea Pilozzi, Emanuela Ricci‐Vitiani, Lucia Int J Cancer Molecular Cancer Biology Colorectal and glioblastoma cancer stem‐like cells (CSCs) are essential for translational research. Cell line authentication by short tandem repeat (STR) profiling ensures reproducibility of results in oncology research. This technique enables to identify mislabeling or cross‐contamination of cell lines. In our study, we provide a reference dataset for a panel of colorectal and glioblastoma CSCs that allows authentication. Each cell line was entered into the cell Line Integrated Molecular Authentication database 2.1 to be compared to the STR profiles of 4485 tumor cell lines. This article also provides clinical data of patients from whom CSCs arose and data on the parent tumor stage and mutations. STR profiles and information of our CSCs are also available in the Cellosaurus database (ExPASy) as identified by unique research resource identifier codes. John Wiley & Sons, Inc. 2020-11-09 2021-03-15 /pmc/articles/PMC7894552/ /pubmed/33128777 http://dx.doi.org/10.1002/ijc.33370 Text en © 2020 The Authors. International Journal of Cancer published by John Wiley & Sons Ltd on behalf of Union for International Cancer Control. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Molecular Cancer Biology
Visconti, Paola
Parodi, Federica
Parodi, Barbara
Casarino, Lucia
Romano, Paolo
Buccarelli, Mariachiara
Pallini, Roberto
D'Alessandris, Quintino Giorgio
Montori, Andrea
Pilozzi, Emanuela
Ricci‐Vitiani, Lucia
Short tandem repeat profiling for the authentication of cancer stem‐like cells
title Short tandem repeat profiling for the authentication of cancer stem‐like cells
title_full Short tandem repeat profiling for the authentication of cancer stem‐like cells
title_fullStr Short tandem repeat profiling for the authentication of cancer stem‐like cells
title_full_unstemmed Short tandem repeat profiling for the authentication of cancer stem‐like cells
title_short Short tandem repeat profiling for the authentication of cancer stem‐like cells
title_sort short tandem repeat profiling for the authentication of cancer stem‐like cells
topic Molecular Cancer Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7894552/
https://www.ncbi.nlm.nih.gov/pubmed/33128777
http://dx.doi.org/10.1002/ijc.33370
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