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Deep learning based automated diagnosis of bone metastases with SPECT thoracic bone images
SPECT nuclear medicine imaging is widely used for treating, diagnosing, evaluating and preventing various serious diseases. The automated classification of medical images is becoming increasingly important in developing computer-aided diagnosis systems. Deep learning, particularly for the convolutio...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7896065/ https://www.ncbi.nlm.nih.gov/pubmed/33608560 http://dx.doi.org/10.1038/s41598-021-83083-6 |
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author | Lin, Qiang Li, Tongtong Cao, Chuangui Cao, Yongchun Man, Zhengxing Wang, Haijun |
author_facet | Lin, Qiang Li, Tongtong Cao, Chuangui Cao, Yongchun Man, Zhengxing Wang, Haijun |
author_sort | Lin, Qiang |
collection | PubMed |
description | SPECT nuclear medicine imaging is widely used for treating, diagnosing, evaluating and preventing various serious diseases. The automated classification of medical images is becoming increasingly important in developing computer-aided diagnosis systems. Deep learning, particularly for the convolutional neural networks, has been widely applied to the classification of medical images. In order to reliably classify SPECT bone images for the automated diagnosis of metastasis on which the SPECT imaging solely focuses, in this paper, we present several deep classifiers based on the deep networks. Specifically, original SPECT images are cropped to extract the thoracic region, followed by a geometric transformation that contributes to augment the original data. We then construct deep classifiers based on the widely used deep networks including VGG, ResNet and DenseNet by fine-tuning their parameters and structures or self-defining new network structures. Experiments on a set of real-world SPECT bone images show that the proposed classifiers perform well in identifying bone metastasis with SPECT imaging. It achieves 0.9807, 0.9900, 0.9830, 0.9890, 0.9802 and 0.9933 for accuracy, precision, recall, specificity, F-1 score and AUC, respectively, on the test samples from the augmented dataset without normalization. |
format | Online Article Text |
id | pubmed-7896065 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-78960652021-02-24 Deep learning based automated diagnosis of bone metastases with SPECT thoracic bone images Lin, Qiang Li, Tongtong Cao, Chuangui Cao, Yongchun Man, Zhengxing Wang, Haijun Sci Rep Article SPECT nuclear medicine imaging is widely used for treating, diagnosing, evaluating and preventing various serious diseases. The automated classification of medical images is becoming increasingly important in developing computer-aided diagnosis systems. Deep learning, particularly for the convolutional neural networks, has been widely applied to the classification of medical images. In order to reliably classify SPECT bone images for the automated diagnosis of metastasis on which the SPECT imaging solely focuses, in this paper, we present several deep classifiers based on the deep networks. Specifically, original SPECT images are cropped to extract the thoracic region, followed by a geometric transformation that contributes to augment the original data. We then construct deep classifiers based on the widely used deep networks including VGG, ResNet and DenseNet by fine-tuning their parameters and structures or self-defining new network structures. Experiments on a set of real-world SPECT bone images show that the proposed classifiers perform well in identifying bone metastasis with SPECT imaging. It achieves 0.9807, 0.9900, 0.9830, 0.9890, 0.9802 and 0.9933 for accuracy, precision, recall, specificity, F-1 score and AUC, respectively, on the test samples from the augmented dataset without normalization. Nature Publishing Group UK 2021-02-19 /pmc/articles/PMC7896065/ /pubmed/33608560 http://dx.doi.org/10.1038/s41598-021-83083-6 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Lin, Qiang Li, Tongtong Cao, Chuangui Cao, Yongchun Man, Zhengxing Wang, Haijun Deep learning based automated diagnosis of bone metastases with SPECT thoracic bone images |
title | Deep learning based automated diagnosis of bone metastases with SPECT thoracic bone images |
title_full | Deep learning based automated diagnosis of bone metastases with SPECT thoracic bone images |
title_fullStr | Deep learning based automated diagnosis of bone metastases with SPECT thoracic bone images |
title_full_unstemmed | Deep learning based automated diagnosis of bone metastases with SPECT thoracic bone images |
title_short | Deep learning based automated diagnosis of bone metastases with SPECT thoracic bone images |
title_sort | deep learning based automated diagnosis of bone metastases with spect thoracic bone images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7896065/ https://www.ncbi.nlm.nih.gov/pubmed/33608560 http://dx.doi.org/10.1038/s41598-021-83083-6 |
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