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Deep learning based automated diagnosis of bone metastases with SPECT thoracic bone images

SPECT nuclear medicine imaging is widely used for treating, diagnosing, evaluating and preventing various serious diseases. The automated classification of medical images is becoming increasingly important in developing computer-aided diagnosis systems. Deep learning, particularly for the convolutio...

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Autores principales: Lin, Qiang, Li, Tongtong, Cao, Chuangui, Cao, Yongchun, Man, Zhengxing, Wang, Haijun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7896065/
https://www.ncbi.nlm.nih.gov/pubmed/33608560
http://dx.doi.org/10.1038/s41598-021-83083-6
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author Lin, Qiang
Li, Tongtong
Cao, Chuangui
Cao, Yongchun
Man, Zhengxing
Wang, Haijun
author_facet Lin, Qiang
Li, Tongtong
Cao, Chuangui
Cao, Yongchun
Man, Zhengxing
Wang, Haijun
author_sort Lin, Qiang
collection PubMed
description SPECT nuclear medicine imaging is widely used for treating, diagnosing, evaluating and preventing various serious diseases. The automated classification of medical images is becoming increasingly important in developing computer-aided diagnosis systems. Deep learning, particularly for the convolutional neural networks, has been widely applied to the classification of medical images. In order to reliably classify SPECT bone images for the automated diagnosis of metastasis on which the SPECT imaging solely focuses, in this paper, we present several deep classifiers based on the deep networks. Specifically, original SPECT images are cropped to extract the thoracic region, followed by a geometric transformation that contributes to augment the original data. We then construct deep classifiers based on the widely used deep networks including VGG, ResNet and DenseNet by fine-tuning their parameters and structures or self-defining new network structures. Experiments on a set of real-world SPECT bone images show that the proposed classifiers perform well in identifying bone metastasis with SPECT imaging. It achieves 0.9807, 0.9900, 0.9830, 0.9890, 0.9802 and 0.9933 for accuracy, precision, recall, specificity, F-1 score and AUC, respectively, on the test samples from the augmented dataset without normalization.
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spelling pubmed-78960652021-02-24 Deep learning based automated diagnosis of bone metastases with SPECT thoracic bone images Lin, Qiang Li, Tongtong Cao, Chuangui Cao, Yongchun Man, Zhengxing Wang, Haijun Sci Rep Article SPECT nuclear medicine imaging is widely used for treating, diagnosing, evaluating and preventing various serious diseases. The automated classification of medical images is becoming increasingly important in developing computer-aided diagnosis systems. Deep learning, particularly for the convolutional neural networks, has been widely applied to the classification of medical images. In order to reliably classify SPECT bone images for the automated diagnosis of metastasis on which the SPECT imaging solely focuses, in this paper, we present several deep classifiers based on the deep networks. Specifically, original SPECT images are cropped to extract the thoracic region, followed by a geometric transformation that contributes to augment the original data. We then construct deep classifiers based on the widely used deep networks including VGG, ResNet and DenseNet by fine-tuning their parameters and structures or self-defining new network structures. Experiments on a set of real-world SPECT bone images show that the proposed classifiers perform well in identifying bone metastasis with SPECT imaging. It achieves 0.9807, 0.9900, 0.9830, 0.9890, 0.9802 and 0.9933 for accuracy, precision, recall, specificity, F-1 score and AUC, respectively, on the test samples from the augmented dataset without normalization. Nature Publishing Group UK 2021-02-19 /pmc/articles/PMC7896065/ /pubmed/33608560 http://dx.doi.org/10.1038/s41598-021-83083-6 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Lin, Qiang
Li, Tongtong
Cao, Chuangui
Cao, Yongchun
Man, Zhengxing
Wang, Haijun
Deep learning based automated diagnosis of bone metastases with SPECT thoracic bone images
title Deep learning based automated diagnosis of bone metastases with SPECT thoracic bone images
title_full Deep learning based automated diagnosis of bone metastases with SPECT thoracic bone images
title_fullStr Deep learning based automated diagnosis of bone metastases with SPECT thoracic bone images
title_full_unstemmed Deep learning based automated diagnosis of bone metastases with SPECT thoracic bone images
title_short Deep learning based automated diagnosis of bone metastases with SPECT thoracic bone images
title_sort deep learning based automated diagnosis of bone metastases with spect thoracic bone images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7896065/
https://www.ncbi.nlm.nih.gov/pubmed/33608560
http://dx.doi.org/10.1038/s41598-021-83083-6
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