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Genetic characteristics and epidemiology of inherited retinal degeneration in Taiwan

Inherited retinal degenerations (IRDs) are a group of phenotypically and genotypically heterogeneous disorders with substantial socioeconomic impact. In this cohort study, we tried to address the genetic characteristics and epidemiology of IRDs in Taiwan. Totally, 312 families with IRDs were identif...

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Autores principales: Chen, Ta-Ching, Huang, Ding-Siang, Lin, Chao-Wen, Yang, Chang-Hao, Yang, Chung-May, Wang, Victoria Y., Lin, Jou-Wei, Luo, Allen Chilun, Hu, Fung-Rong, Chen, Pei-Lung
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7896090/
https://www.ncbi.nlm.nih.gov/pubmed/33608557
http://dx.doi.org/10.1038/s41525-021-00180-1
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author Chen, Ta-Ching
Huang, Ding-Siang
Lin, Chao-Wen
Yang, Chang-Hao
Yang, Chung-May
Wang, Victoria Y.
Lin, Jou-Wei
Luo, Allen Chilun
Hu, Fung-Rong
Chen, Pei-Lung
author_facet Chen, Ta-Ching
Huang, Ding-Siang
Lin, Chao-Wen
Yang, Chang-Hao
Yang, Chung-May
Wang, Victoria Y.
Lin, Jou-Wei
Luo, Allen Chilun
Hu, Fung-Rong
Chen, Pei-Lung
author_sort Chen, Ta-Ching
collection PubMed
description Inherited retinal degenerations (IRDs) are a group of phenotypically and genotypically heterogeneous disorders with substantial socioeconomic impact. In this cohort study, we tried to address the genetic characteristics and epidemiology of IRDs in Taiwan. Totally, 312 families with IRDs were identified and recruited and genetic testing was performed via probe capture-based NGS targeting 212 IRD-related genes. Statistical analysis was based on the proband of each affected family. Disease-causing genotypes were identified in 178 families (57.1%). ABCA4 variants were the most common cause of disease in this cohort (27 families, 15.2%), whereas CYP4V2 variants were the most common cause for the single phenotype—Bietti’s crystalline dystrophy (12 families, 3.8%). Some variants such as ABCA4:c.1804C>T, CYP4V2:c.802-8_810delinsGC, and EYS:c6416G>A were population-specific disease-causing hotspots. Probands affected by ABCA4, RPGR, RP1L1, and CEP290 sought medical help earlier while patients affected by EYS and CYP4V2 visited our clinic at an older age. To evaluate the representativeness of our cohort in the genetic epidemiology of IRDs in Taiwan, our demographic data were compared with that of the total IRD population in Taiwan, obtained from the National Health Insurance Research Database. This is currently the largest-scale, comprehensive study investigating the genetic characteristics and epidemiology of IRD in Taiwan. These data could help patients and caregivers to adopt precision genomic medicine and novel gene therapies in near future.
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spelling pubmed-78960902021-03-03 Genetic characteristics and epidemiology of inherited retinal degeneration in Taiwan Chen, Ta-Ching Huang, Ding-Siang Lin, Chao-Wen Yang, Chang-Hao Yang, Chung-May Wang, Victoria Y. Lin, Jou-Wei Luo, Allen Chilun Hu, Fung-Rong Chen, Pei-Lung NPJ Genom Med Article Inherited retinal degenerations (IRDs) are a group of phenotypically and genotypically heterogeneous disorders with substantial socioeconomic impact. In this cohort study, we tried to address the genetic characteristics and epidemiology of IRDs in Taiwan. Totally, 312 families with IRDs were identified and recruited and genetic testing was performed via probe capture-based NGS targeting 212 IRD-related genes. Statistical analysis was based on the proband of each affected family. Disease-causing genotypes were identified in 178 families (57.1%). ABCA4 variants were the most common cause of disease in this cohort (27 families, 15.2%), whereas CYP4V2 variants were the most common cause for the single phenotype—Bietti’s crystalline dystrophy (12 families, 3.8%). Some variants such as ABCA4:c.1804C>T, CYP4V2:c.802-8_810delinsGC, and EYS:c6416G>A were population-specific disease-causing hotspots. Probands affected by ABCA4, RPGR, RP1L1, and CEP290 sought medical help earlier while patients affected by EYS and CYP4V2 visited our clinic at an older age. To evaluate the representativeness of our cohort in the genetic epidemiology of IRDs in Taiwan, our demographic data were compared with that of the total IRD population in Taiwan, obtained from the National Health Insurance Research Database. This is currently the largest-scale, comprehensive study investigating the genetic characteristics and epidemiology of IRD in Taiwan. These data could help patients and caregivers to adopt precision genomic medicine and novel gene therapies in near future. Nature Publishing Group UK 2021-02-19 /pmc/articles/PMC7896090/ /pubmed/33608557 http://dx.doi.org/10.1038/s41525-021-00180-1 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Chen, Ta-Ching
Huang, Ding-Siang
Lin, Chao-Wen
Yang, Chang-Hao
Yang, Chung-May
Wang, Victoria Y.
Lin, Jou-Wei
Luo, Allen Chilun
Hu, Fung-Rong
Chen, Pei-Lung
Genetic characteristics and epidemiology of inherited retinal degeneration in Taiwan
title Genetic characteristics and epidemiology of inherited retinal degeneration in Taiwan
title_full Genetic characteristics and epidemiology of inherited retinal degeneration in Taiwan
title_fullStr Genetic characteristics and epidemiology of inherited retinal degeneration in Taiwan
title_full_unstemmed Genetic characteristics and epidemiology of inherited retinal degeneration in Taiwan
title_short Genetic characteristics and epidemiology of inherited retinal degeneration in Taiwan
title_sort genetic characteristics and epidemiology of inherited retinal degeneration in taiwan
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7896090/
https://www.ncbi.nlm.nih.gov/pubmed/33608557
http://dx.doi.org/10.1038/s41525-021-00180-1
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