Cargando…

Physical mapping of repetitive oligonucleotides facilitates the establishment of a genome map-based karyotype to identify chromosomal variations in peanut

BACKGROUND: Chromosomal variants play important roles in crop breeding and genetic research. The development of single-stranded oligonucleotide (oligo) probes simplifies the process of fluorescence in situ hybridization (FISH) and facilitates chromosomal identification in many species. Genome sequen...

Descripción completa

Detalles Bibliográficos
Autores principales:	Fu, Liuyang, Wang, Qian, Li, Lina, Lang, Tao, Guo, Junjia, Wang, Siyu, Sun, Ziqi, Han, Suoyi, Huang, Bingyan, Dong, Wenzhao, Zhang, Xinyou, Du, Pei
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2021
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7896385/ https://www.ncbi.nlm.nih.gov/pubmed/33610178 http://dx.doi.org/10.1186/s12870-021-02875-0

Ejemplares similares

Development of an oligonucleotide dye solution facilitates high throughput and cost-efficient chromosome identification in peanut
por: Du, Pei, et al.
Publicado: (2019)

High-resolution chromosome painting with repetitive and single-copy oligonucleotides in Arachis species identifies structural rearrangements and genome differentiation
por: Du, Pei, et al.
Publicado: (2018)

Mapping of a QTL associated with sucrose content in peanut kernels using BSA-seq
por: Guo, Junjia, et al.
Publicado: (2023)

QTL mapping of web blotch resistance in peanut by high-throughput genome-wide sequencing
por: Liu, Hua, et al.
Publicado: (2020)

Development and evaluation of the utility of GenoBaits Peanut 40K for a peanut MAGIC population
por: Sun, Ziqi, et al.
Publicado: (2023)

Gene Co-expression Network Analysis of the Comparative Transcriptome Identifies Hub Genes Associated With Resistance to Aspergillus flavus L. in Cultivated Peanut (Arachis hypogaea L.)
por: Cui, Mengjie, et al.
Publicado: (2022)

Creation of herbicide‐resistance in allotetraploid peanut using CRISPR/Cas9‐meditated cytosine base‐editing
por: Shi, Lei, et al.
Publicado: (2023)

Differential gene expression in leaf tissues between mutant and wild-type genotypes response to late leaf spot in peanut (Arachis hypogaea L.)
por: Han, Suoyi, et al.
Publicado: (2017)

Genome-Wide Identification and Expression Analysis of AP2/ERF Transcription Factor Related to Drought Stress in Cultivated Peanut (Arachis hypogaea L.)
por: Cui, Mengjie, et al.
Publicado: (2021)

QTL identification, fine mapping, and marker development for breeding peanut (Arachis hypogaea L.) resistant to bacterial wilt
por: Qi, Feiyan, et al.
Publicado: (2022)

Transcriptome analysis of pod mutant reveals plant hormones are important regulators in controlling pod size in peanut (Arachis hypogaea L.)
por: Wang, Yaqi, et al.
Publicado: (2022)

Genetic Diversity, Population Structure, and Botanical Variety of 320 Global Peanut Accessions Revealed Through Tunable Genotyping-by-Sequencing
por: Zheng, Zheng, et al.
Publicado: (2018)

A SNP-Based Linkage Map Revealed QTLs for Resistance to Early and Late Leaf Spot Diseases in Peanut (Arachis hypogaea L.)
por: Han, Suoyi, et al.
Publicado: (2018)

Comparative transcriptomics analysis of developing peanut (Arachis hypogaea L.) pods reveals candidate genes affecting peanut seed size
por: Wu, Yue, et al.
Publicado: (2022)

Chromosome Mapping of Repetitive Sequences in Rachycentron canadum (Perciformes: Rachycentridae): Implications for Karyotypic Evolution and Perspectives for Biotechnological Uses
por: Jacobina, Uedson Pereira, et al.
Publicado: (2011)

Identification of quantitative trait loci and development of diagnostic markers for growth habit traits in peanut (Arachis hypogaea L.)
por: Fang, Yuanjin, et al.
Publicado: (2023)

Identification of QTL for kernel weight and size and analysis of the pentatricopeptide repeat (PPR) gene family in cultivated peanut (Arachis hypogaea L.)
por: Fang, Yuanjin, et al.
Publicado: (2023)

Chloroplast Phylogenomic Analyses Reveal a Maternal Hybridization Event Leading to the Formation of Cultivated Peanuts
por: Tian, Xiangyu, et al.
Publicado: (2021)

PeanutMap: an online genome database for comparative molecular maps of peanut
por: Jesubatham, Arun M, et al.
Publicado: (2006)

Marker-assisted backcrossing to improve seed oleic acid content in four elite and popular peanut (Arachis hypogaea L.) cultivars with high oil content
por: Huang, Bingyan, et al.
Publicado: (2019)

Karyotype variability in six Amazonian species of the family Curimatidae (Characiformes) revealed by repetitive sequence mapping
por: Moraes, Juliana Nascimento, et al.
Publicado: (2022)

Identification of lipoxygenase (LOX) genes from legumes and their responses in wild type and cultivated peanut upon Aspergillus flavus infection
por: Song, Hui, et al.
Publicado: (2016)

Cytological and transcriptomic analysis to unveil the mechanism of web blotch resistance in Peanut
por: Wu, Xiaohui, et al.
Publicado: (2023)

Karyotype diversity and chromosomal organization of repetitive DNA in Tityus obscurus (Scorpiones, Buthidae)
por: Almeida, Bruno Rafael Ribeiro de, et al.
Publicado: (2017)

Chromosome mapping of repetitive sequences in four Serrasalmidae species (Characiformes)
por: Ribeiro, Leila Braga, et al.
Publicado: (2014)

Karyotype and cytogenetic mapping of 9 classes of repetitive DNAs in the genome of the naked catfish Mystus bocourti (Siluriformes, Bagridae)
por: Supiwong, Weerayuth, et al.
Publicado: (2013)

Chromosome mapping of repetitive sequences in Anostomidae species: implications for genomic and sex chromosome evolution
por: da Silva, Edson Lourenço, et al.
Publicado: (2012)

Contrasting the Chromosomal Organization of Repetitive DNAs in Two Gryllidae Crickets with Highly Divergent Karyotypes
por: Palacios-Gimenez, Octavio M., et al.
Publicado: (2015)

Karyotype heterogeneity in Philodendron s.l. (Araceae) revealed by chromosome mapping of rDNA loci
por: Vasconcelos, Emanuelle Varão, et al.
Publicado: (2018)

PhyloChromoMap, a Tool for Mapping Phylogenomic History along Chromosomes, Reveals the Dynamic Nature of Karyotype Evolution in Plasmodium falciparum
por: Cerón-Romero, Mario A, et al.
Publicado: (2018)

Chromosomal structures and repetitive sequences divergence in Cucumis species revealed by comparative cytogenetic mapping
por: Zhang, Yunxia, et al.
Publicado: (2015)

Repetitive sequences and structural chromosome alterations promote intraspecific variations in Zea mays L. karyotype
por: Silva, Jéssica Coutinho, et al.
Publicado: (2020)

The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication
por: Zhuang, Weijian, et al.
Publicado: (2019)

Chromosomal Mapping of Repetitive DNAs in Triportheus trifurcatus (Characidae, Characiformes): Insights into the Differentiation of the Z and W Chromosomes
por: Yano, Cassia Fernanda, et al.
Publicado: (2014)

Tracking the evolution of sex chromosome systems in Melanoplinae grasshoppers through chromosomal mapping of repetitive DNA sequences
por: Palacios-Gimenez, Octavio M, et al.
Publicado: (2013)

Reconstruction of the ancestral marsupial karyotype from comparative gene maps
por: Deakin, Janine E, et al.
Publicado: (2013)

Genomic Organization of Repetitive DNA in Woodpeckers (Aves, Piciformes): Implications for Karyotype and ZW Sex Chromosome Differentiation
por: de Oliveira, Thays Duarte, et al.
Publicado: (2017)

Identification of two new repetitive elements and chromosomal mapping of repetitive DNA sequences in the fish Gymnothorax unicolor (Anguilliformes: Muraenidae)
por: Coluccia, E., et al.
Publicado: (2011)

Comparative chromosome mapping of repetitive sequences. Implications for genomic evolution in the fish, Hoplias malabaricus
por: Cioffi, Marcelo B, et al.
Publicado: (2009)

Chromosomal Diversification in Pseudacanthicus Species (Loricariidae, Hypostominae) Revealed by Comparative Mapping of Repetitive Sequences
por: Santos da Silva, Kevin, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_99mvmbpuotq4oenqak9016nb8g