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SCHISTOX: An individual based model for the epidemiology and control of schistosomiasis
A stochastic individual based model, SCHISTOX, has been developed for the study of schistosome transmission dynamics and the impact of control by mass drug administration. More novel aspects that can be investigated include individual level adherence and access to treatment, multiple communities, hu...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
KeAi Publishing
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7897994/ https://www.ncbi.nlm.nih.gov/pubmed/33665519 http://dx.doi.org/10.1016/j.idm.2021.01.010 |
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author | Graham, Matthew Ayabina, Diepreye Lucas, Tim CD. Collyer, Benjamin S. Medley, Graham F. Hollingsworth, T. Deirdre Toor, Jaspreet |
author_facet | Graham, Matthew Ayabina, Diepreye Lucas, Tim CD. Collyer, Benjamin S. Medley, Graham F. Hollingsworth, T. Deirdre Toor, Jaspreet |
author_sort | Graham, Matthew |
collection | PubMed |
description | A stochastic individual based model, SCHISTOX, has been developed for the study of schistosome transmission dynamics and the impact of control by mass drug administration. More novel aspects that can be investigated include individual level adherence and access to treatment, multiple communities, human sex population dynamics, and implementation of a potential vaccine. Many of the model parameters have been estimated within previous studies and have been shown to vary between communities, such as the age-specific contact rates governing the age profiles of infection. However, uncertainty remains as there are wide ranges for certain parameter values and a few remain relatively unknown. We analyse the model dynamics by parameterizing it with published parameter values. We also discuss the development of SCHISTOX in the form of a publicly available open-source GitHub repository. The next key development stage involves validating the model by calibrating to epidemiological data. |
format | Online Article Text |
id | pubmed-7897994 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | KeAi Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-78979942021-03-03 SCHISTOX: An individual based model for the epidemiology and control of schistosomiasis Graham, Matthew Ayabina, Diepreye Lucas, Tim CD. Collyer, Benjamin S. Medley, Graham F. Hollingsworth, T. Deirdre Toor, Jaspreet Infect Dis Model Original Research Article A stochastic individual based model, SCHISTOX, has been developed for the study of schistosome transmission dynamics and the impact of control by mass drug administration. More novel aspects that can be investigated include individual level adherence and access to treatment, multiple communities, human sex population dynamics, and implementation of a potential vaccine. Many of the model parameters have been estimated within previous studies and have been shown to vary between communities, such as the age-specific contact rates governing the age profiles of infection. However, uncertainty remains as there are wide ranges for certain parameter values and a few remain relatively unknown. We analyse the model dynamics by parameterizing it with published parameter values. We also discuss the development of SCHISTOX in the form of a publicly available open-source GitHub repository. The next key development stage involves validating the model by calibrating to epidemiological data. KeAi Publishing 2021-02-04 /pmc/articles/PMC7897994/ /pubmed/33665519 http://dx.doi.org/10.1016/j.idm.2021.01.010 Text en © 2021 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original Research Article Graham, Matthew Ayabina, Diepreye Lucas, Tim CD. Collyer, Benjamin S. Medley, Graham F. Hollingsworth, T. Deirdre Toor, Jaspreet SCHISTOX: An individual based model for the epidemiology and control of schistosomiasis |
title | SCHISTOX: An individual based model for the epidemiology and control of schistosomiasis |
title_full | SCHISTOX: An individual based model for the epidemiology and control of schistosomiasis |
title_fullStr | SCHISTOX: An individual based model for the epidemiology and control of schistosomiasis |
title_full_unstemmed | SCHISTOX: An individual based model for the epidemiology and control of schistosomiasis |
title_short | SCHISTOX: An individual based model for the epidemiology and control of schistosomiasis |
title_sort | schistox: an individual based model for the epidemiology and control of schistosomiasis |
topic | Original Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7897994/ https://www.ncbi.nlm.nih.gov/pubmed/33665519 http://dx.doi.org/10.1016/j.idm.2021.01.010 |
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