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SCHISTOX: An individual based model for the epidemiology and control of schistosomiasis

A stochastic individual based model, SCHISTOX, has been developed for the study of schistosome transmission dynamics and the impact of control by mass drug administration. More novel aspects that can be investigated include individual level adherence and access to treatment, multiple communities, hu...

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Detalles Bibliográficos
Autores principales: Graham, Matthew, Ayabina, Diepreye, Lucas, Tim CD., Collyer, Benjamin S., Medley, Graham F., Hollingsworth, T. Deirdre, Toor, Jaspreet
Formato: Online Artículo Texto
Lenguaje:English
Publicado: KeAi Publishing 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7897994/
https://www.ncbi.nlm.nih.gov/pubmed/33665519
http://dx.doi.org/10.1016/j.idm.2021.01.010
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author Graham, Matthew
Ayabina, Diepreye
Lucas, Tim CD.
Collyer, Benjamin S.
Medley, Graham F.
Hollingsworth, T. Deirdre
Toor, Jaspreet
author_facet Graham, Matthew
Ayabina, Diepreye
Lucas, Tim CD.
Collyer, Benjamin S.
Medley, Graham F.
Hollingsworth, T. Deirdre
Toor, Jaspreet
author_sort Graham, Matthew
collection PubMed
description A stochastic individual based model, SCHISTOX, has been developed for the study of schistosome transmission dynamics and the impact of control by mass drug administration. More novel aspects that can be investigated include individual level adherence and access to treatment, multiple communities, human sex population dynamics, and implementation of a potential vaccine. Many of the model parameters have been estimated within previous studies and have been shown to vary between communities, such as the age-specific contact rates governing the age profiles of infection. However, uncertainty remains as there are wide ranges for certain parameter values and a few remain relatively unknown. We analyse the model dynamics by parameterizing it with published parameter values. We also discuss the development of SCHISTOX in the form of a publicly available open-source GitHub repository. The next key development stage involves validating the model by calibrating to epidemiological data.
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spelling pubmed-78979942021-03-03 SCHISTOX: An individual based model for the epidemiology and control of schistosomiasis Graham, Matthew Ayabina, Diepreye Lucas, Tim CD. Collyer, Benjamin S. Medley, Graham F. Hollingsworth, T. Deirdre Toor, Jaspreet Infect Dis Model Original Research Article A stochastic individual based model, SCHISTOX, has been developed for the study of schistosome transmission dynamics and the impact of control by mass drug administration. More novel aspects that can be investigated include individual level adherence and access to treatment, multiple communities, human sex population dynamics, and implementation of a potential vaccine. Many of the model parameters have been estimated within previous studies and have been shown to vary between communities, such as the age-specific contact rates governing the age profiles of infection. However, uncertainty remains as there are wide ranges for certain parameter values and a few remain relatively unknown. We analyse the model dynamics by parameterizing it with published parameter values. We also discuss the development of SCHISTOX in the form of a publicly available open-source GitHub repository. The next key development stage involves validating the model by calibrating to epidemiological data. KeAi Publishing 2021-02-04 /pmc/articles/PMC7897994/ /pubmed/33665519 http://dx.doi.org/10.1016/j.idm.2021.01.010 Text en © 2021 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Research Article
Graham, Matthew
Ayabina, Diepreye
Lucas, Tim CD.
Collyer, Benjamin S.
Medley, Graham F.
Hollingsworth, T. Deirdre
Toor, Jaspreet
SCHISTOX: An individual based model for the epidemiology and control of schistosomiasis
title SCHISTOX: An individual based model for the epidemiology and control of schistosomiasis
title_full SCHISTOX: An individual based model for the epidemiology and control of schistosomiasis
title_fullStr SCHISTOX: An individual based model for the epidemiology and control of schistosomiasis
title_full_unstemmed SCHISTOX: An individual based model for the epidemiology and control of schistosomiasis
title_short SCHISTOX: An individual based model for the epidemiology and control of schistosomiasis
title_sort schistox: an individual based model for the epidemiology and control of schistosomiasis
topic Original Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7897994/
https://www.ncbi.nlm.nih.gov/pubmed/33665519
http://dx.doi.org/10.1016/j.idm.2021.01.010
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