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Towards a unified data infrastructure to support European and global microbiome research: a call to action

High‐quality microbiome research relies on the integrity, management and quality of supporting data. Currently biobanks and culture collections have different formats and approaches to data management. This necessitates a standard data format to underpin research, particularly in line with the FAIR...

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Detalles Bibliográficos
Autores principales: Ryan, Matthew J., Schloter, Michael, Berg, Gabriele, Kinkel, Linda L., Eversole, Kellye, Macklin, James A., Rybakova, Daria, Sessitsch, Angela
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7898335/
https://www.ncbi.nlm.nih.gov/pubmed/33196130
http://dx.doi.org/10.1111/1462-2920.15323
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author Ryan, Matthew J.
Schloter, Michael
Berg, Gabriele
Kinkel, Linda L.
Eversole, Kellye
Macklin, James A.
Rybakova, Daria
Sessitsch, Angela
author_facet Ryan, Matthew J.
Schloter, Michael
Berg, Gabriele
Kinkel, Linda L.
Eversole, Kellye
Macklin, James A.
Rybakova, Daria
Sessitsch, Angela
author_sort Ryan, Matthew J.
collection PubMed
description High‐quality microbiome research relies on the integrity, management and quality of supporting data. Currently biobanks and culture collections have different formats and approaches to data management. This necessitates a standard data format to underpin research, particularly in line with the FAIR data standards of findability, accessibility, interoperability and reusability. We address the importance of a unified, coordinated approach that ensures compatibility of data between that needed by biobanks and culture collections, but also to ensure linkage between bioinformatic databases and the wider research community.
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spelling pubmed-78983352021-03-03 Towards a unified data infrastructure to support European and global microbiome research: a call to action Ryan, Matthew J. Schloter, Michael Berg, Gabriele Kinkel, Linda L. Eversole, Kellye Macklin, James A. Rybakova, Daria Sessitsch, Angela Environ Microbiol Correspondence High‐quality microbiome research relies on the integrity, management and quality of supporting data. Currently biobanks and culture collections have different formats and approaches to data management. This necessitates a standard data format to underpin research, particularly in line with the FAIR data standards of findability, accessibility, interoperability and reusability. We address the importance of a unified, coordinated approach that ensures compatibility of data between that needed by biobanks and culture collections, but also to ensure linkage between bioinformatic databases and the wider research community. John Wiley & Sons, Inc. 2020-12-03 2021-01 /pmc/articles/PMC7898335/ /pubmed/33196130 http://dx.doi.org/10.1111/1462-2920.15323 Text en © 2020 The Authors. Environmental Microbiology published by Society for Applied Microbiology and John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Correspondence
Ryan, Matthew J.
Schloter, Michael
Berg, Gabriele
Kinkel, Linda L.
Eversole, Kellye
Macklin, James A.
Rybakova, Daria
Sessitsch, Angela
Towards a unified data infrastructure to support European and global microbiome research: a call to action
title Towards a unified data infrastructure to support European and global microbiome research: a call to action
title_full Towards a unified data infrastructure to support European and global microbiome research: a call to action
title_fullStr Towards a unified data infrastructure to support European and global microbiome research: a call to action
title_full_unstemmed Towards a unified data infrastructure to support European and global microbiome research: a call to action
title_short Towards a unified data infrastructure to support European and global microbiome research: a call to action
title_sort towards a unified data infrastructure to support european and global microbiome research: a call to action
topic Correspondence
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7898335/
https://www.ncbi.nlm.nih.gov/pubmed/33196130
http://dx.doi.org/10.1111/1462-2920.15323
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