Cargando…

Dynamic Allocation of Carbon Storage and Nutrient-Dependent Exudation in a Revised Genome-Scale Model of Prochlorococcus

Microbial life in the oceans impacts the entire marine ecosystem, global biogeochemistry and climate. The marine cyanobacterium Prochlorococcus, an abundant component of this ecosystem, releases a significant fraction of the carbon fixed through photosynthesis, but the amount, timing and molecular c...

Descripción completa

Detalles Bibliográficos
Autores principales:	Ofaim, Shany, Sulheim, Snorre, Almaas, Eivind, Sher, Daniel, Segrè, Daniel
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2021
Materias:	Genetics
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7900632/ https://www.ncbi.nlm.nih.gov/pubmed/33633777 http://dx.doi.org/10.3389/fgene.2021.586293

Ejemplares similares

Addressing uncertainty in genome-scale metabolic model reconstruction and analysis
por: Bernstein, David B., et al.
Publicado: (2021)

Automatic reconstruction of metabolic pathways from identified biosynthetic gene clusters
por: Sulheim, Snorre, et al.
Publicado: (2021)

Correction to: Automatic reconstruction of metabolic pathways from identified biosynthetic gene clusters
por: Sulheim, Snorre, et al.
Publicado: (2021)

Prochlorococcus Exudate Stimulates Heterotrophic Bacterial Competition with Rival Phytoplankton for Available Nitrogen
por: Calfee, Benjamin C., et al.
Publicado: (2022)

Single-cell measurements and modelling reveal substantial organic carbon acquisition by Prochlorococcus
por: Wu, Zhen, et al.
Publicado: (2022)

Prochlorococcus Cells Rely on Microbial Interactions Rather than on Chlorotic Resting Stages To Survive Long-Term Nutrient Starvation
por: Roth-Rosenberg, Dalit, et al.
Publicado: (2020)

Phototroph-heterotroph interactions during growth and long-term starvation across Prochlorococcus and Alteromonas diversity
por: Weissberg, Osnat, et al.
Publicado: (2022)

Carbon Fate and Flux in Prochlorococcus under Nitrogen Limitation
por: Szul, Martin J., et al.
Publicado: (2019)

Enzyme-Constrained Models and Omics Analysis of Streptomyces coelicolor Reveal Metabolic Changes that Enhance Heterologous Production
por: Sulheim, Snorre, et al.
Publicado: (2020)

Glutamine Synthetase Sensitivity to Oxidative Modification during Nutrient Starvation in Prochlorococcus marinus PCC 9511
por: Gómez-Baena, Guadalupe, et al.
Publicado: (2015)

Global scale phylogeography of functional traits and microdiversity in Prochlorococcus
por: Ustick, Lucas J., et al.
Publicado: (2023)

Ocular Features and Mutation Spectrum of Patients With Familial Exudative Vitreoretinopathy
por: Tao, Tianchang, et al.
Publicado: (2021)

Gene Order Phylogeny of the Genus Prochlorococcus
por: Luo, Haiwei, et al.
Publicado: (2008)

Photoinactivation of Photosystem II in Prochlorococcus and Synechococcus
por: Murphy, Cole D., et al.
Publicado: (2017)

Adaptive Evolution of Phosphorus Metabolism in Prochlorococcus
por: Casey, John R., et al.
Publicado: (2016)

Linking pangenomes and metagenomes: the Prochlorococcus metapangenome
por: Delmont, Tom O., et al.
Publicado: (2018)

Frequency of mispackaging of Prochlorococcus DNA by cyanophage
por: Laurenceau, Raphaël, et al.
Publicado: (2020)

Transcriptional Mechanisms of Thermal Acclimation in Prochlorococcus
por: Alonso-Sáez, Laura, et al.
Publicado: (2023)

Basin-scale biogeography of Prochlorococcus and SAR11 ecotype replication
por: Larkin, Alyse A., et al.
Publicado: (2022)

NetMet: A Network-Based Tool for Predicting Metabolic Capacities of Microbial Species and their Interactions
por: Tal, Ofir, et al.
Publicado: (2020)

Differential Assimilation of Inorganic Carbon and Leucine by Prochlorococcus in the Oligotrophic North Pacific Subtropical Gyre
por: Björkman, Karin M., et al.
Publicado: (2015)

Correction for Szul et al., “Carbon Fate and Flux in Prochlorococcus under Nitrogen Limitation”
por: Szul, Martin J., et al.
Publicado: (2019)

Genomes of diverse isolates of the marine cyanobacterium Prochlorococcus
por: Biller, Steven J., et al.
Publicado: (2014)

Genome Rearrangement Shapes Prochlorococcus Ecological Adaptation
por: Yan, Wei, et al.
Publicado: (2018)

Co-culture and biogeography of Prochlorococcus and SAR11
por: Becker, Jamie W., et al.
Publicado: (2019)

Acclimation and stress response of Prochlorococcus to low salinity
por: He, Xiayu, et al.
Publicado: (2022)

Structural and molecular basis for urea recognition by Prochlorococcus
por: Wang, Chen, et al.
Publicado: (2023)

Genome-scale reconstructions to assess metabolic phylogeny and organism clustering
por: Schulz, Christian, et al.
Publicado: (2020)

ErrorTracer: an algorithm for identifying the origins of inconsistencies in genome-scale metabolic models
por: Martyushenko, Nikolay, et al.
Publicado: (2020)

ModelExplorer - software for visual inspection and inconsistency correction of genome-scale metabolic reconstructions
por: Martyushenko, Nikolay, et al.
Publicado: (2019)

Tradeoffs in microbial carbon allocation may mediate soil carbon storage in future climates
por: Kivlin, Stephanie N., et al.
Publicado: (2013)

Immune response from a resource allocation perspective
por: Rauw, Wendy M.
Publicado: (2012)

Parameter inference for enzyme and temperature constrained genome-scale models
por: Pettersen, Jakob Peder, et al.
Publicado: (2023)

Glucose Uptake and Its Effect on Gene Expression in Prochlorococcus
por: Gómez-Baena, Guadalupe, et al.
Publicado: (2008)

Patterns and Implications of Gene Gain and Loss in the Evolution of Prochlorococcus
por: Kettler, Gregory C, et al.
Publicado: (2007)

Intertwined Evolutionary Histories of Marine Synechococcus and Prochlorococcus marinus
por: Zhaxybayeva, Olga, et al.
Publicado: (2009)

Glucose Uptake in Prochlorococcus: Diversity of Kinetics and Effects on the Metabolism
por: Muñoz-Marín, María del Carmen, et al.
Publicado: (2017)

Toward a genetic system in the marine cyanobacterium Prochlorococcus
por: Laurenceau, Raphaël, et al.
Publicado: (2020)

Investigating zinc toxicity responses in marine Prochlorococcus and Synechococcus
por: Sarker, Indrani, et al.
Publicado: (2021)

Trophic interactions with heterotrophic bacteria limit the range of Prochlorococcus
por: Follett, Christopher L., et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_tv9c65sj3sqjkvilrsqb5cc7vh