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Fast uncertainty quantification of tracer distribution in the brain interstitial fluid with multilevel and quasi Monte Carlo

Efficient uncertainty quantification algorithms are key to understand the propagation of uncertainty—from uncertain input parameters to uncertain output quantities—in high resolution mathematical models of brain physiology. Advanced Monte Carlo methods such as quasi Monte Carlo (QMC) and multilevel...

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Autores principales: Croci, Matteo, Vinje, Vegard, Rognes, Marie E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7900999/
https://www.ncbi.nlm.nih.gov/pubmed/33174347
http://dx.doi.org/10.1002/cnm.3412
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author Croci, Matteo
Vinje, Vegard
Rognes, Marie E.
author_facet Croci, Matteo
Vinje, Vegard
Rognes, Marie E.
author_sort Croci, Matteo
collection PubMed
description Efficient uncertainty quantification algorithms are key to understand the propagation of uncertainty—from uncertain input parameters to uncertain output quantities—in high resolution mathematical models of brain physiology. Advanced Monte Carlo methods such as quasi Monte Carlo (QMC) and multilevel Monte Carlo (MLMC) have the potential to dramatically improve upon standard Monte Carlo (MC) methods, but their applicability and performance in biomedical applications is underexplored. In this paper, we design and apply QMC and MLMC methods to quantify uncertainty in a convection‐diffusion model of tracer transport within the brain. We show that QMC outperforms standard MC simulations when the number of random inputs is small. MLMC considerably outperforms both QMC and standard MC methods and should therefore be preferred for brain transport models.
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spelling pubmed-79009992021-03-03 Fast uncertainty quantification of tracer distribution in the brain interstitial fluid with multilevel and quasi Monte Carlo Croci, Matteo Vinje, Vegard Rognes, Marie E. Int J Numer Method Biomed Eng Research Article ‐ Fundamental Efficient uncertainty quantification algorithms are key to understand the propagation of uncertainty—from uncertain input parameters to uncertain output quantities—in high resolution mathematical models of brain physiology. Advanced Monte Carlo methods such as quasi Monte Carlo (QMC) and multilevel Monte Carlo (MLMC) have the potential to dramatically improve upon standard Monte Carlo (MC) methods, but their applicability and performance in biomedical applications is underexplored. In this paper, we design and apply QMC and MLMC methods to quantify uncertainty in a convection‐diffusion model of tracer transport within the brain. We show that QMC outperforms standard MC simulations when the number of random inputs is small. MLMC considerably outperforms both QMC and standard MC methods and should therefore be preferred for brain transport models. John Wiley & Sons, Inc. 2020-12-17 2021-01 /pmc/articles/PMC7900999/ /pubmed/33174347 http://dx.doi.org/10.1002/cnm.3412 Text en © 2020 The Authors. International Journal for Numerical Methods in Biomedical Engineering published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article ‐ Fundamental
Croci, Matteo
Vinje, Vegard
Rognes, Marie E.
Fast uncertainty quantification of tracer distribution in the brain interstitial fluid with multilevel and quasi Monte Carlo
title Fast uncertainty quantification of tracer distribution in the brain interstitial fluid with multilevel and quasi Monte Carlo
title_full Fast uncertainty quantification of tracer distribution in the brain interstitial fluid with multilevel and quasi Monte Carlo
title_fullStr Fast uncertainty quantification of tracer distribution in the brain interstitial fluid with multilevel and quasi Monte Carlo
title_full_unstemmed Fast uncertainty quantification of tracer distribution in the brain interstitial fluid with multilevel and quasi Monte Carlo
title_short Fast uncertainty quantification of tracer distribution in the brain interstitial fluid with multilevel and quasi Monte Carlo
title_sort fast uncertainty quantification of tracer distribution in the brain interstitial fluid with multilevel and quasi monte carlo
topic Research Article ‐ Fundamental
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7900999/
https://www.ncbi.nlm.nih.gov/pubmed/33174347
http://dx.doi.org/10.1002/cnm.3412
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