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A Streptomyces venezuelae Cell-Free Toolkit for Synthetic Biology
[Image: see text] Prokaryotic cell-free coupled transcription–translation (TX-TL) systems are emerging as a powerful tool to examine natural product biosynthetic pathways in a test tube. The key advantages of this approach are the reduced experimental time scales and controlled reaction conditions....
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7901020/ https://www.ncbi.nlm.nih.gov/pubmed/33497199 http://dx.doi.org/10.1021/acssynbio.0c00581 |
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author | Moore, Simon J. Lai, Hung-En Chee, Soo-Mei Toh, Ming Coode, Seth Chengan, Kameshwari Capel, Patrick Corre, Christophe de los Santos, Emmanuel LC Freemont, Paul S. |
author_facet | Moore, Simon J. Lai, Hung-En Chee, Soo-Mei Toh, Ming Coode, Seth Chengan, Kameshwari Capel, Patrick Corre, Christophe de los Santos, Emmanuel LC Freemont, Paul S. |
author_sort | Moore, Simon J. |
collection | PubMed |
description | [Image: see text] Prokaryotic cell-free coupled transcription–translation (TX-TL) systems are emerging as a powerful tool to examine natural product biosynthetic pathways in a test tube. The key advantages of this approach are the reduced experimental time scales and controlled reaction conditions. To realize this potential, it is essential to develop specialized cell-free systems in organisms enriched for biosynthetic gene clusters. This requires strong protein production and well-characterized synthetic biology tools. The Streptomyces genus is a major source of natural products. To study enzymes and pathways from Streptomyces, we originally developed a homologous Streptomyces cell-free system to provide a native protein folding environment, a high G+C (%) tRNA pool, and an active background metabolism. However, our initial yields were low (36 μg/mL) and showed a high level of batch-to-batch variation. Here, we present an updated high-yield and robust Streptomyces TX-TL protocol, reaching up to yields of 266 μg/mL of expressed recombinant protein. To complement this, we rapidly characterize a range of DNA parts with different reporters, express high G+C (%) biosynthetic genes, and demonstrate an initial proof of concept for combined transcription, translation, and biosynthesis of Streptomyces metabolic pathways in a single “one-pot” reaction. |
format | Online Article Text |
id | pubmed-7901020 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-79010202021-02-23 A Streptomyces venezuelae Cell-Free Toolkit for Synthetic Biology Moore, Simon J. Lai, Hung-En Chee, Soo-Mei Toh, Ming Coode, Seth Chengan, Kameshwari Capel, Patrick Corre, Christophe de los Santos, Emmanuel LC Freemont, Paul S. ACS Synth Biol [Image: see text] Prokaryotic cell-free coupled transcription–translation (TX-TL) systems are emerging as a powerful tool to examine natural product biosynthetic pathways in a test tube. The key advantages of this approach are the reduced experimental time scales and controlled reaction conditions. To realize this potential, it is essential to develop specialized cell-free systems in organisms enriched for biosynthetic gene clusters. This requires strong protein production and well-characterized synthetic biology tools. The Streptomyces genus is a major source of natural products. To study enzymes and pathways from Streptomyces, we originally developed a homologous Streptomyces cell-free system to provide a native protein folding environment, a high G+C (%) tRNA pool, and an active background metabolism. However, our initial yields were low (36 μg/mL) and showed a high level of batch-to-batch variation. Here, we present an updated high-yield and robust Streptomyces TX-TL protocol, reaching up to yields of 266 μg/mL of expressed recombinant protein. To complement this, we rapidly characterize a range of DNA parts with different reporters, express high G+C (%) biosynthetic genes, and demonstrate an initial proof of concept for combined transcription, translation, and biosynthesis of Streptomyces metabolic pathways in a single “one-pot” reaction. American Chemical Society 2021-01-26 2021-02-19 /pmc/articles/PMC7901020/ /pubmed/33497199 http://dx.doi.org/10.1021/acssynbio.0c00581 Text en © 2021 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited. |
spellingShingle | Moore, Simon J. Lai, Hung-En Chee, Soo-Mei Toh, Ming Coode, Seth Chengan, Kameshwari Capel, Patrick Corre, Christophe de los Santos, Emmanuel LC Freemont, Paul S. A Streptomyces venezuelae Cell-Free Toolkit for Synthetic Biology |
title | A Streptomyces venezuelae Cell-Free
Toolkit for Synthetic Biology |
title_full | A Streptomyces venezuelae Cell-Free
Toolkit for Synthetic Biology |
title_fullStr | A Streptomyces venezuelae Cell-Free
Toolkit for Synthetic Biology |
title_full_unstemmed | A Streptomyces venezuelae Cell-Free
Toolkit for Synthetic Biology |
title_short | A Streptomyces venezuelae Cell-Free
Toolkit for Synthetic Biology |
title_sort | streptomyces venezuelae cell-free
toolkit for synthetic biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7901020/ https://www.ncbi.nlm.nih.gov/pubmed/33497199 http://dx.doi.org/10.1021/acssynbio.0c00581 |
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