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A Streptomyces venezuelae Cell-Free Toolkit for Synthetic Biology

[Image: see text] Prokaryotic cell-free coupled transcription–translation (TX-TL) systems are emerging as a powerful tool to examine natural product biosynthetic pathways in a test tube. The key advantages of this approach are the reduced experimental time scales and controlled reaction conditions....

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Autores principales: Moore, Simon J., Lai, Hung-En, Chee, Soo-Mei, Toh, Ming, Coode, Seth, Chengan, Kameshwari, Capel, Patrick, Corre, Christophe, de los Santos, Emmanuel LC, Freemont, Paul S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2021
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7901020/
https://www.ncbi.nlm.nih.gov/pubmed/33497199
http://dx.doi.org/10.1021/acssynbio.0c00581
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author Moore, Simon J.
Lai, Hung-En
Chee, Soo-Mei
Toh, Ming
Coode, Seth
Chengan, Kameshwari
Capel, Patrick
Corre, Christophe
de los Santos, Emmanuel LC
Freemont, Paul S.
author_facet Moore, Simon J.
Lai, Hung-En
Chee, Soo-Mei
Toh, Ming
Coode, Seth
Chengan, Kameshwari
Capel, Patrick
Corre, Christophe
de los Santos, Emmanuel LC
Freemont, Paul S.
author_sort Moore, Simon J.
collection PubMed
description [Image: see text] Prokaryotic cell-free coupled transcription–translation (TX-TL) systems are emerging as a powerful tool to examine natural product biosynthetic pathways in a test tube. The key advantages of this approach are the reduced experimental time scales and controlled reaction conditions. To realize this potential, it is essential to develop specialized cell-free systems in organisms enriched for biosynthetic gene clusters. This requires strong protein production and well-characterized synthetic biology tools. The Streptomyces genus is a major source of natural products. To study enzymes and pathways from Streptomyces, we originally developed a homologous Streptomyces cell-free system to provide a native protein folding environment, a high G+C (%) tRNA pool, and an active background metabolism. However, our initial yields were low (36 μg/mL) and showed a high level of batch-to-batch variation. Here, we present an updated high-yield and robust Streptomyces TX-TL protocol, reaching up to yields of 266 μg/mL of expressed recombinant protein. To complement this, we rapidly characterize a range of DNA parts with different reporters, express high G+C (%) biosynthetic genes, and demonstrate an initial proof of concept for combined transcription, translation, and biosynthesis of Streptomyces metabolic pathways in a single “one-pot” reaction.
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spelling pubmed-79010202021-02-23 A Streptomyces venezuelae Cell-Free Toolkit for Synthetic Biology Moore, Simon J. Lai, Hung-En Chee, Soo-Mei Toh, Ming Coode, Seth Chengan, Kameshwari Capel, Patrick Corre, Christophe de los Santos, Emmanuel LC Freemont, Paul S. ACS Synth Biol [Image: see text] Prokaryotic cell-free coupled transcription–translation (TX-TL) systems are emerging as a powerful tool to examine natural product biosynthetic pathways in a test tube. The key advantages of this approach are the reduced experimental time scales and controlled reaction conditions. To realize this potential, it is essential to develop specialized cell-free systems in organisms enriched for biosynthetic gene clusters. This requires strong protein production and well-characterized synthetic biology tools. The Streptomyces genus is a major source of natural products. To study enzymes and pathways from Streptomyces, we originally developed a homologous Streptomyces cell-free system to provide a native protein folding environment, a high G+C (%) tRNA pool, and an active background metabolism. However, our initial yields were low (36 μg/mL) and showed a high level of batch-to-batch variation. Here, we present an updated high-yield and robust Streptomyces TX-TL protocol, reaching up to yields of 266 μg/mL of expressed recombinant protein. To complement this, we rapidly characterize a range of DNA parts with different reporters, express high G+C (%) biosynthetic genes, and demonstrate an initial proof of concept for combined transcription, translation, and biosynthesis of Streptomyces metabolic pathways in a single “one-pot” reaction. American Chemical Society 2021-01-26 2021-02-19 /pmc/articles/PMC7901020/ /pubmed/33497199 http://dx.doi.org/10.1021/acssynbio.0c00581 Text en © 2021 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited.
spellingShingle Moore, Simon J.
Lai, Hung-En
Chee, Soo-Mei
Toh, Ming
Coode, Seth
Chengan, Kameshwari
Capel, Patrick
Corre, Christophe
de los Santos, Emmanuel LC
Freemont, Paul S.
A Streptomyces venezuelae Cell-Free Toolkit for Synthetic Biology
title A Streptomyces venezuelae Cell-Free Toolkit for Synthetic Biology
title_full A Streptomyces venezuelae Cell-Free Toolkit for Synthetic Biology
title_fullStr A Streptomyces venezuelae Cell-Free Toolkit for Synthetic Biology
title_full_unstemmed A Streptomyces venezuelae Cell-Free Toolkit for Synthetic Biology
title_short A Streptomyces venezuelae Cell-Free Toolkit for Synthetic Biology
title_sort streptomyces venezuelae cell-free toolkit for synthetic biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7901020/
https://www.ncbi.nlm.nih.gov/pubmed/33497199
http://dx.doi.org/10.1021/acssynbio.0c00581
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