Cargando…
Analysis of Differentially Expressed Genes of Chrysoperla sinica Related to Flight Capacity by Transcriptome
The lacewing Chrysoperla sinica (Tjeder) is a common natural enemy of many insect pests in China and is frequently employed for biological control programs. Adults make migratory flights after emergence, which reduces their effectiveness as biological control agents. Previously, we proved that 2-d-o...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7901589/ https://www.ncbi.nlm.nih.gov/pubmed/33620485 http://dx.doi.org/10.1093/jisesa/ieab003 |
_version_ | 1783654399499829248 |
---|---|
author | Liu, Zhong-Fang Liang, Yao-yao Sun, Xiao-ting Yang, Jing Zhang, Peng-Jiu Gao, Yue Fan, Jian-Bin Fan, Ren-Jun |
author_facet | Liu, Zhong-Fang Liang, Yao-yao Sun, Xiao-ting Yang, Jing Zhang, Peng-Jiu Gao, Yue Fan, Jian-Bin Fan, Ren-Jun |
author_sort | Liu, Zhong-Fang |
collection | PubMed |
description | The lacewing Chrysoperla sinica (Tjeder) is a common natural enemy of many insect pests in China and is frequently employed for biological control programs. Adults make migratory flights after emergence, which reduces their effectiveness as biological control agents. Previously, we proved that 2-d-old unmated females exhibited significantly stronger flight ability than 3-d-old ones. Meanwhile, 3-d-old unmated adults flew significantly longer distances than mated ones. In this study, Illumina RNA sequencing was performed to characterize differentially expressed genes (DEGs) between virgin and mated adults of different ages in a single female strain of C. sinica. In total, 713,563,726 clean reads were obtained and de novo assembled into 109,165 unigenes with an average length of 847 bp (N50 of 1,754 bp), among which 4,382 (4.01%) unigenes matched known proteins. Based on these annotations, many putative transcripts were related to C. sinica’s flight capacity and muscle structure, energy supply, growth, development, environmental adaptability, and metabolism of nutritional components and bioactive components. In addition, the differential expression of transcripts between different ages and mating status were analyzed, and DEGs participating in flight capacity and muscles were detected, including glutathione hydrolase, NAD-specific glutamate dehydrogenase, aminopeptidase, and acidic amino acid decarboxylase. The DEGs with functions associated with flight capacity and muscles exhibited higher transcript levels for younger (2 d--old) virgins. This comprehensive C. sinica transcriptomic data provide a foundation for a better understanding of the molecular mechanisms underlying the flight capacity to meet the physiological demands of flight muscles in C. sinica. |
format | Online Article Text |
id | pubmed-7901589 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-79015892021-02-26 Analysis of Differentially Expressed Genes of Chrysoperla sinica Related to Flight Capacity by Transcriptome Liu, Zhong-Fang Liang, Yao-yao Sun, Xiao-ting Yang, Jing Zhang, Peng-Jiu Gao, Yue Fan, Jian-Bin Fan, Ren-Jun J Insect Sci Molecular Entomological Genetics The lacewing Chrysoperla sinica (Tjeder) is a common natural enemy of many insect pests in China and is frequently employed for biological control programs. Adults make migratory flights after emergence, which reduces their effectiveness as biological control agents. Previously, we proved that 2-d-old unmated females exhibited significantly stronger flight ability than 3-d-old ones. Meanwhile, 3-d-old unmated adults flew significantly longer distances than mated ones. In this study, Illumina RNA sequencing was performed to characterize differentially expressed genes (DEGs) between virgin and mated adults of different ages in a single female strain of C. sinica. In total, 713,563,726 clean reads were obtained and de novo assembled into 109,165 unigenes with an average length of 847 bp (N50 of 1,754 bp), among which 4,382 (4.01%) unigenes matched known proteins. Based on these annotations, many putative transcripts were related to C. sinica’s flight capacity and muscle structure, energy supply, growth, development, environmental adaptability, and metabolism of nutritional components and bioactive components. In addition, the differential expression of transcripts between different ages and mating status were analyzed, and DEGs participating in flight capacity and muscles were detected, including glutathione hydrolase, NAD-specific glutamate dehydrogenase, aminopeptidase, and acidic amino acid decarboxylase. The DEGs with functions associated with flight capacity and muscles exhibited higher transcript levels for younger (2 d--old) virgins. This comprehensive C. sinica transcriptomic data provide a foundation for a better understanding of the molecular mechanisms underlying the flight capacity to meet the physiological demands of flight muscles in C. sinica. Oxford University Press 2021-02-23 /pmc/articles/PMC7901589/ /pubmed/33620485 http://dx.doi.org/10.1093/jisesa/ieab003 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of Entomological Society of America. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Molecular Entomological Genetics Liu, Zhong-Fang Liang, Yao-yao Sun, Xiao-ting Yang, Jing Zhang, Peng-Jiu Gao, Yue Fan, Jian-Bin Fan, Ren-Jun Analysis of Differentially Expressed Genes of Chrysoperla sinica Related to Flight Capacity by Transcriptome |
title | Analysis of Differentially Expressed Genes of Chrysoperla sinica Related to Flight Capacity by Transcriptome |
title_full | Analysis of Differentially Expressed Genes of Chrysoperla sinica Related to Flight Capacity by Transcriptome |
title_fullStr | Analysis of Differentially Expressed Genes of Chrysoperla sinica Related to Flight Capacity by Transcriptome |
title_full_unstemmed | Analysis of Differentially Expressed Genes of Chrysoperla sinica Related to Flight Capacity by Transcriptome |
title_short | Analysis of Differentially Expressed Genes of Chrysoperla sinica Related to Flight Capacity by Transcriptome |
title_sort | analysis of differentially expressed genes of chrysoperla sinica related to flight capacity by transcriptome |
topic | Molecular Entomological Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7901589/ https://www.ncbi.nlm.nih.gov/pubmed/33620485 http://dx.doi.org/10.1093/jisesa/ieab003 |
work_keys_str_mv | AT liuzhongfang analysisofdifferentiallyexpressedgenesofchrysoperlasinicarelatedtoflightcapacitybytranscriptome AT liangyaoyao analysisofdifferentiallyexpressedgenesofchrysoperlasinicarelatedtoflightcapacitybytranscriptome AT sunxiaoting analysisofdifferentiallyexpressedgenesofchrysoperlasinicarelatedtoflightcapacitybytranscriptome AT yangjing analysisofdifferentiallyexpressedgenesofchrysoperlasinicarelatedtoflightcapacitybytranscriptome AT zhangpengjiu analysisofdifferentiallyexpressedgenesofchrysoperlasinicarelatedtoflightcapacitybytranscriptome AT gaoyue analysisofdifferentiallyexpressedgenesofchrysoperlasinicarelatedtoflightcapacitybytranscriptome AT fanjianbin analysisofdifferentiallyexpressedgenesofchrysoperlasinicarelatedtoflightcapacitybytranscriptome AT fanrenjun analysisofdifferentiallyexpressedgenesofchrysoperlasinicarelatedtoflightcapacitybytranscriptome |