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Analysis of Differentially Expressed Genes of Chrysoperla sinica Related to Flight Capacity by Transcriptome

The lacewing Chrysoperla sinica (Tjeder) is a common natural enemy of many insect pests in China and is frequently employed for biological control programs. Adults make migratory flights after emergence, which reduces their effectiveness as biological control agents. Previously, we proved that 2-d-o...

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Autores principales: Liu, Zhong-Fang, Liang, Yao-yao, Sun, Xiao-ting, Yang, Jing, Zhang, Peng-Jiu, Gao, Yue, Fan, Jian-Bin, Fan, Ren-Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7901589/
https://www.ncbi.nlm.nih.gov/pubmed/33620485
http://dx.doi.org/10.1093/jisesa/ieab003
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author Liu, Zhong-Fang
Liang, Yao-yao
Sun, Xiao-ting
Yang, Jing
Zhang, Peng-Jiu
Gao, Yue
Fan, Jian-Bin
Fan, Ren-Jun
author_facet Liu, Zhong-Fang
Liang, Yao-yao
Sun, Xiao-ting
Yang, Jing
Zhang, Peng-Jiu
Gao, Yue
Fan, Jian-Bin
Fan, Ren-Jun
author_sort Liu, Zhong-Fang
collection PubMed
description The lacewing Chrysoperla sinica (Tjeder) is a common natural enemy of many insect pests in China and is frequently employed for biological control programs. Adults make migratory flights after emergence, which reduces their effectiveness as biological control agents. Previously, we proved that 2-d-old unmated females exhibited significantly stronger flight ability than 3-d-old ones. Meanwhile, 3-d-old unmated adults flew significantly longer distances than mated ones. In this study, Illumina RNA sequencing was performed to characterize differentially expressed genes (DEGs) between virgin and mated adults of different ages in a single female strain of C. sinica. In total, 713,563,726 clean reads were obtained and de novo assembled into 109,165 unigenes with an average length of 847 bp (N50 of 1,754 bp), among which 4,382 (4.01%) unigenes matched known proteins. Based on these annotations, many putative transcripts were related to C. sinica’s flight capacity and muscle structure, energy supply, growth, development, environmental adaptability, and metabolism of nutritional components and bioactive components. In addition, the differential expression of transcripts between different ages and mating status were analyzed, and DEGs participating in flight capacity and muscles were detected, including glutathione hydrolase, NAD-specific glutamate dehydrogenase, aminopeptidase, and acidic amino acid decarboxylase. The DEGs with functions associated with flight capacity and muscles exhibited higher transcript levels for younger (2 d--old) virgins. This comprehensive C. sinica transcriptomic data provide a foundation for a better understanding of the molecular mechanisms underlying the flight capacity to meet the physiological demands of flight muscles in C. sinica.
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spelling pubmed-79015892021-02-26 Analysis of Differentially Expressed Genes of Chrysoperla sinica Related to Flight Capacity by Transcriptome Liu, Zhong-Fang Liang, Yao-yao Sun, Xiao-ting Yang, Jing Zhang, Peng-Jiu Gao, Yue Fan, Jian-Bin Fan, Ren-Jun J Insect Sci Molecular Entomological Genetics The lacewing Chrysoperla sinica (Tjeder) is a common natural enemy of many insect pests in China and is frequently employed for biological control programs. Adults make migratory flights after emergence, which reduces their effectiveness as biological control agents. Previously, we proved that 2-d-old unmated females exhibited significantly stronger flight ability than 3-d-old ones. Meanwhile, 3-d-old unmated adults flew significantly longer distances than mated ones. In this study, Illumina RNA sequencing was performed to characterize differentially expressed genes (DEGs) between virgin and mated adults of different ages in a single female strain of C. sinica. In total, 713,563,726 clean reads were obtained and de novo assembled into 109,165 unigenes with an average length of 847 bp (N50 of 1,754 bp), among which 4,382 (4.01%) unigenes matched known proteins. Based on these annotations, many putative transcripts were related to C. sinica’s flight capacity and muscle structure, energy supply, growth, development, environmental adaptability, and metabolism of nutritional components and bioactive components. In addition, the differential expression of transcripts between different ages and mating status were analyzed, and DEGs participating in flight capacity and muscles were detected, including glutathione hydrolase, NAD-specific glutamate dehydrogenase, aminopeptidase, and acidic amino acid decarboxylase. The DEGs with functions associated with flight capacity and muscles exhibited higher transcript levels for younger (2 d--old) virgins. This comprehensive C. sinica transcriptomic data provide a foundation for a better understanding of the molecular mechanisms underlying the flight capacity to meet the physiological demands of flight muscles in C. sinica. Oxford University Press 2021-02-23 /pmc/articles/PMC7901589/ /pubmed/33620485 http://dx.doi.org/10.1093/jisesa/ieab003 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of Entomological Society of America. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Molecular Entomological Genetics
Liu, Zhong-Fang
Liang, Yao-yao
Sun, Xiao-ting
Yang, Jing
Zhang, Peng-Jiu
Gao, Yue
Fan, Jian-Bin
Fan, Ren-Jun
Analysis of Differentially Expressed Genes of Chrysoperla sinica Related to Flight Capacity by Transcriptome
title Analysis of Differentially Expressed Genes of Chrysoperla sinica Related to Flight Capacity by Transcriptome
title_full Analysis of Differentially Expressed Genes of Chrysoperla sinica Related to Flight Capacity by Transcriptome
title_fullStr Analysis of Differentially Expressed Genes of Chrysoperla sinica Related to Flight Capacity by Transcriptome
title_full_unstemmed Analysis of Differentially Expressed Genes of Chrysoperla sinica Related to Flight Capacity by Transcriptome
title_short Analysis of Differentially Expressed Genes of Chrysoperla sinica Related to Flight Capacity by Transcriptome
title_sort analysis of differentially expressed genes of chrysoperla sinica related to flight capacity by transcriptome
topic Molecular Entomological Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7901589/
https://www.ncbi.nlm.nih.gov/pubmed/33620485
http://dx.doi.org/10.1093/jisesa/ieab003
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