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Computational learning of features for automated colonic polyp classification

Shape, texture, and color are critical features for assessing the degree of dysplasia in colonic polyps. A comprehensive analysis of these features is presented in this paper. Shape features are extracted using generic Fourier descriptor. The nonsubsampled contourlet transform is used as texture and...

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Autores principales: Bora, Kangkana, Bhuyan, M. K., Kasugai, Kunio, Mallik, Saurav, Zhao, Zhongming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7902635/
https://www.ncbi.nlm.nih.gov/pubmed/33623086
http://dx.doi.org/10.1038/s41598-021-83788-8
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author Bora, Kangkana
Bhuyan, M. K.
Kasugai, Kunio
Mallik, Saurav
Zhao, Zhongming
author_facet Bora, Kangkana
Bhuyan, M. K.
Kasugai, Kunio
Mallik, Saurav
Zhao, Zhongming
author_sort Bora, Kangkana
collection PubMed
description Shape, texture, and color are critical features for assessing the degree of dysplasia in colonic polyps. A comprehensive analysis of these features is presented in this paper. Shape features are extracted using generic Fourier descriptor. The nonsubsampled contourlet transform is used as texture and color feature descriptor, with different combinations of filters. Analysis of variance (ANOVA) is applied to measure statistical significance of the contribution of different descriptors between two colonic polyps: non-neoplastic and neoplastic. Final descriptors selected after ANOVA are optimized using the fuzzy entropy-based feature ranking algorithm. Finally, classification is performed using Least Square Support Vector Machine and Multi-layer Perceptron with five-fold cross-validation to avoid overfitting. Evaluation of our analytical approach using two datasets suggested that the feature descriptors could efficiently designate a colonic polyp, which subsequently can help the early detection of colorectal carcinoma. Based on the comparison with four deep learning models, we demonstrate that the proposed approach out-performs the existing feature-based methods of colonic polyp identification.
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spelling pubmed-79026352021-02-24 Computational learning of features for automated colonic polyp classification Bora, Kangkana Bhuyan, M. K. Kasugai, Kunio Mallik, Saurav Zhao, Zhongming Sci Rep Article Shape, texture, and color are critical features for assessing the degree of dysplasia in colonic polyps. A comprehensive analysis of these features is presented in this paper. Shape features are extracted using generic Fourier descriptor. The nonsubsampled contourlet transform is used as texture and color feature descriptor, with different combinations of filters. Analysis of variance (ANOVA) is applied to measure statistical significance of the contribution of different descriptors between two colonic polyps: non-neoplastic and neoplastic. Final descriptors selected after ANOVA are optimized using the fuzzy entropy-based feature ranking algorithm. Finally, classification is performed using Least Square Support Vector Machine and Multi-layer Perceptron with five-fold cross-validation to avoid overfitting. Evaluation of our analytical approach using two datasets suggested that the feature descriptors could efficiently designate a colonic polyp, which subsequently can help the early detection of colorectal carcinoma. Based on the comparison with four deep learning models, we demonstrate that the proposed approach out-performs the existing feature-based methods of colonic polyp identification. Nature Publishing Group UK 2021-02-23 /pmc/articles/PMC7902635/ /pubmed/33623086 http://dx.doi.org/10.1038/s41598-021-83788-8 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Bora, Kangkana
Bhuyan, M. K.
Kasugai, Kunio
Mallik, Saurav
Zhao, Zhongming
Computational learning of features for automated colonic polyp classification
title Computational learning of features for automated colonic polyp classification
title_full Computational learning of features for automated colonic polyp classification
title_fullStr Computational learning of features for automated colonic polyp classification
title_full_unstemmed Computational learning of features for automated colonic polyp classification
title_short Computational learning of features for automated colonic polyp classification
title_sort computational learning of features for automated colonic polyp classification
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7902635/
https://www.ncbi.nlm.nih.gov/pubmed/33623086
http://dx.doi.org/10.1038/s41598-021-83788-8
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