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Predicting Tree Species From 3D Laser Scanning Point Clouds Using Deep Learning
Automated species classification from 3D point clouds is still a challenge. It is, however, an important task for laser scanning-based forest inventory, ecosystem models, and to support forest management. Here, we tested the performance of an image classification approach based on convolutional neur...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7902704/ https://www.ncbi.nlm.nih.gov/pubmed/33643364 http://dx.doi.org/10.3389/fpls.2021.635440 |
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author | Seidel, Dominik Annighöfer, Peter Thielman, Anton Seifert, Quentin Edward Thauer, Jan-Henrik Glatthorn, Jonas Ehbrecht, Martin Kneib, Thomas Ammer, Christian |
author_facet | Seidel, Dominik Annighöfer, Peter Thielman, Anton Seifert, Quentin Edward Thauer, Jan-Henrik Glatthorn, Jonas Ehbrecht, Martin Kneib, Thomas Ammer, Christian |
author_sort | Seidel, Dominik |
collection | PubMed |
description | Automated species classification from 3D point clouds is still a challenge. It is, however, an important task for laser scanning-based forest inventory, ecosystem models, and to support forest management. Here, we tested the performance of an image classification approach based on convolutional neural networks (CNNs) with the aim to classify 3D point clouds of seven tree species based on 2D representation in a computationally efficient way. We were particularly interested in how the approach would perform with artificially increased training data size based on image augmentation techniques. Our approach yielded a high classification accuracy (86%) and the confusion matrix revealed that despite rather small sample sizes of the training data for some tree species, classification accuracy was high. We could partly relate this to the successful application of the image augmentation technique, improving our result by 6% in total and 13, 14, and 24% for ash, oak and pine, respectively. The introduced approach is hence not only applicable to small-sized datasets, it is also computationally effective since it relies on 2D instead of 3D data to be processed in the CNN. Our approach was faster and more accurate when compared to the point cloud-based “PointNet” approach. |
format | Online Article Text |
id | pubmed-7902704 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-79027042021-02-25 Predicting Tree Species From 3D Laser Scanning Point Clouds Using Deep Learning Seidel, Dominik Annighöfer, Peter Thielman, Anton Seifert, Quentin Edward Thauer, Jan-Henrik Glatthorn, Jonas Ehbrecht, Martin Kneib, Thomas Ammer, Christian Front Plant Sci Plant Science Automated species classification from 3D point clouds is still a challenge. It is, however, an important task for laser scanning-based forest inventory, ecosystem models, and to support forest management. Here, we tested the performance of an image classification approach based on convolutional neural networks (CNNs) with the aim to classify 3D point clouds of seven tree species based on 2D representation in a computationally efficient way. We were particularly interested in how the approach would perform with artificially increased training data size based on image augmentation techniques. Our approach yielded a high classification accuracy (86%) and the confusion matrix revealed that despite rather small sample sizes of the training data for some tree species, classification accuracy was high. We could partly relate this to the successful application of the image augmentation technique, improving our result by 6% in total and 13, 14, and 24% for ash, oak and pine, respectively. The introduced approach is hence not only applicable to small-sized datasets, it is also computationally effective since it relies on 2D instead of 3D data to be processed in the CNN. Our approach was faster and more accurate when compared to the point cloud-based “PointNet” approach. Frontiers Media S.A. 2021-02-10 /pmc/articles/PMC7902704/ /pubmed/33643364 http://dx.doi.org/10.3389/fpls.2021.635440 Text en Copyright © 2021 Seidel, Annighöfer, Thielman, Seifert, Thauer, Glatthorn, Ehbrecht, Kneib and Ammer. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Seidel, Dominik Annighöfer, Peter Thielman, Anton Seifert, Quentin Edward Thauer, Jan-Henrik Glatthorn, Jonas Ehbrecht, Martin Kneib, Thomas Ammer, Christian Predicting Tree Species From 3D Laser Scanning Point Clouds Using Deep Learning |
title | Predicting Tree Species From 3D Laser Scanning Point Clouds Using Deep Learning |
title_full | Predicting Tree Species From 3D Laser Scanning Point Clouds Using Deep Learning |
title_fullStr | Predicting Tree Species From 3D Laser Scanning Point Clouds Using Deep Learning |
title_full_unstemmed | Predicting Tree Species From 3D Laser Scanning Point Clouds Using Deep Learning |
title_short | Predicting Tree Species From 3D Laser Scanning Point Clouds Using Deep Learning |
title_sort | predicting tree species from 3d laser scanning point clouds using deep learning |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7902704/ https://www.ncbi.nlm.nih.gov/pubmed/33643364 http://dx.doi.org/10.3389/fpls.2021.635440 |
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