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ANMerge: A Comprehensive and Accessible Alzheimer’s Disease Patient-Level Dataset
BACKGROUND: Accessible datasets are of fundamental importance to the advancement of Alzheimer’s disease (AD) research. The AddNeuroMed consortium conducted a longitudinal observational cohort study with the aim to discover AD biomarkers. During this study, a broad selection of data modalities was me...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
IOS Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7902946/ https://www.ncbi.nlm.nih.gov/pubmed/33285634 http://dx.doi.org/10.3233/JAD-200948 |
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author | Birkenbihl, Colin Westwood, Sarah Shi, Liu Nevado-Holgado, Alejo Westman, Eric Lovestone, Simon Hofmann-Apitius, Martin |
author_facet | Birkenbihl, Colin Westwood, Sarah Shi, Liu Nevado-Holgado, Alejo Westman, Eric Lovestone, Simon Hofmann-Apitius, Martin |
author_sort | Birkenbihl, Colin |
collection | PubMed |
description | BACKGROUND: Accessible datasets are of fundamental importance to the advancement of Alzheimer’s disease (AD) research. The AddNeuroMed consortium conducted a longitudinal observational cohort study with the aim to discover AD biomarkers. During this study, a broad selection of data modalities was measured including clinical assessments, magnetic resonance imaging, genotyping, transcriptomic profiling, and blood plasma proteomics. Some of the collected data were shared with third-party researchers. However, this data was incomplete, erroneous, and lacking in interoperability. OBJECTIVE: To provide the research community with an accessible, multimodal, patient-level AD cohort dataset. METHODS: We systematically addressed several limitations of the originally shared resources and provided additional unreleased data to enhance the dataset. RESULTS: In this work, we publish and describe ANMerge, a new version of the AddNeuroMed dataset. ANMerge includes multimodal data from 1,702 study participants and is accessible to the research community via a centralized portal. CONCLUSION: ANMerge is an information rich patient-level data resource that can serve as a discovery and validation cohort for data-driven AD research, such as, for example, machine learning and artificial intelligence approaches. |
format | Online Article Text |
id | pubmed-7902946 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | IOS Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-79029462021-03-09 ANMerge: A Comprehensive and Accessible Alzheimer’s Disease Patient-Level Dataset Birkenbihl, Colin Westwood, Sarah Shi, Liu Nevado-Holgado, Alejo Westman, Eric Lovestone, Simon Hofmann-Apitius, Martin J Alzheimers Dis Research Article BACKGROUND: Accessible datasets are of fundamental importance to the advancement of Alzheimer’s disease (AD) research. The AddNeuroMed consortium conducted a longitudinal observational cohort study with the aim to discover AD biomarkers. During this study, a broad selection of data modalities was measured including clinical assessments, magnetic resonance imaging, genotyping, transcriptomic profiling, and blood plasma proteomics. Some of the collected data were shared with third-party researchers. However, this data was incomplete, erroneous, and lacking in interoperability. OBJECTIVE: To provide the research community with an accessible, multimodal, patient-level AD cohort dataset. METHODS: We systematically addressed several limitations of the originally shared resources and provided additional unreleased data to enhance the dataset. RESULTS: In this work, we publish and describe ANMerge, a new version of the AddNeuroMed dataset. ANMerge includes multimodal data from 1,702 study participants and is accessible to the research community via a centralized portal. CONCLUSION: ANMerge is an information rich patient-level data resource that can serve as a discovery and validation cohort for data-driven AD research, such as, for example, machine learning and artificial intelligence approaches. IOS Press 2021-01-05 /pmc/articles/PMC7902946/ /pubmed/33285634 http://dx.doi.org/10.3233/JAD-200948 Text en © 2021 – The authors. Published by IOS Press https://creativecommons.org/licenses/by-nc/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Non-Commercial (CC BY-NC 4.0) License (https://creativecommons.org/licenses/by-nc/4.0/) , which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Birkenbihl, Colin Westwood, Sarah Shi, Liu Nevado-Holgado, Alejo Westman, Eric Lovestone, Simon Hofmann-Apitius, Martin ANMerge: A Comprehensive and Accessible Alzheimer’s Disease Patient-Level Dataset |
title | ANMerge: A Comprehensive and Accessible Alzheimer’s Disease Patient-Level Dataset |
title_full | ANMerge: A Comprehensive and Accessible Alzheimer’s Disease Patient-Level Dataset |
title_fullStr | ANMerge: A Comprehensive and Accessible Alzheimer’s Disease Patient-Level Dataset |
title_full_unstemmed | ANMerge: A Comprehensive and Accessible Alzheimer’s Disease Patient-Level Dataset |
title_short | ANMerge: A Comprehensive and Accessible Alzheimer’s Disease Patient-Level Dataset |
title_sort | anmerge: a comprehensive and accessible alzheimer’s disease patient-level dataset |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7902946/ https://www.ncbi.nlm.nih.gov/pubmed/33285634 http://dx.doi.org/10.3233/JAD-200948 |
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