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Machine learning-based prediction of Sasang constitution types using comprehensive clinical information and identification of key features for diagnosis
BACKGROUND: Despite the importance of accurate Sasang type diagnosis, a unique form of Korean medicine, there have been concerns about consistency among diagnoses. We investigate a data-driven integrative diagnostic model by applying machine learning to a multicenter clinical dataset with comprehens...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7903349/ https://www.ncbi.nlm.nih.gov/pubmed/33665087 http://dx.doi.org/10.1016/j.imr.2020.100668 |
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author | Park, Sa-Yoon Park, Musun Lee, Won-Yung Lee, Choong-Yeol Kim, Ji-Hwan Lee, Siwoo Kim, Chang-Eop |
author_facet | Park, Sa-Yoon Park, Musun Lee, Won-Yung Lee, Choong-Yeol Kim, Ji-Hwan Lee, Siwoo Kim, Chang-Eop |
author_sort | Park, Sa-Yoon |
collection | PubMed |
description | BACKGROUND: Despite the importance of accurate Sasang type diagnosis, a unique form of Korean medicine, there have been concerns about consistency among diagnoses. We investigate a data-driven integrative diagnostic model by applying machine learning to a multicenter clinical dataset with comprehensive features. METHODS: Extremely randomized trees (ERT), support vector machines, multinomial logistic regression, and K-nearest neighbor were applied, and performances were evaluated by cross-validation. The feature importance of the classifier was analyzed to understand which information is crucial in diagnosis. RESULTS: The ERT classifier showed the highest performance, with an overall f1 score of 0.60 ± 0.060. The feature classes of body measurement, personality, general information, and cold–heat were more decisive than others in classifying Sasang types. Costal angle was the most informative feature. In pairwise classification, we found Sasang type-dependent distinctions that body measurement features played a key role in TE-SE and TE-SY datasets, while personality and cold–heat features showed importance in SE-SY dataset. CONCLUSION: Current study investigated a comprehensive diagnostic model for Sasang type using machine learning and achieved better performance than previous studies. This study helps data-driven decision making in clinics by revealing key features contributing to the Sasang type diagnosis. |
format | Online Article Text |
id | pubmed-7903349 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-79033492021-03-03 Machine learning-based prediction of Sasang constitution types using comprehensive clinical information and identification of key features for diagnosis Park, Sa-Yoon Park, Musun Lee, Won-Yung Lee, Choong-Yeol Kim, Ji-Hwan Lee, Siwoo Kim, Chang-Eop Integr Med Res Original Article BACKGROUND: Despite the importance of accurate Sasang type diagnosis, a unique form of Korean medicine, there have been concerns about consistency among diagnoses. We investigate a data-driven integrative diagnostic model by applying machine learning to a multicenter clinical dataset with comprehensive features. METHODS: Extremely randomized trees (ERT), support vector machines, multinomial logistic regression, and K-nearest neighbor were applied, and performances were evaluated by cross-validation. The feature importance of the classifier was analyzed to understand which information is crucial in diagnosis. RESULTS: The ERT classifier showed the highest performance, with an overall f1 score of 0.60 ± 0.060. The feature classes of body measurement, personality, general information, and cold–heat were more decisive than others in classifying Sasang types. Costal angle was the most informative feature. In pairwise classification, we found Sasang type-dependent distinctions that body measurement features played a key role in TE-SE and TE-SY datasets, while personality and cold–heat features showed importance in SE-SY dataset. CONCLUSION: Current study investigated a comprehensive diagnostic model for Sasang type using machine learning and achieved better performance than previous studies. This study helps data-driven decision making in clinics by revealing key features contributing to the Sasang type diagnosis. Elsevier 2021-09 2020-09-30 /pmc/articles/PMC7903349/ /pubmed/33665087 http://dx.doi.org/10.1016/j.imr.2020.100668 Text en © 2021 Korea Institute of Oriental Medicine. Publishing services by Elsevier B.V. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original Article Park, Sa-Yoon Park, Musun Lee, Won-Yung Lee, Choong-Yeol Kim, Ji-Hwan Lee, Siwoo Kim, Chang-Eop Machine learning-based prediction of Sasang constitution types using comprehensive clinical information and identification of key features for diagnosis |
title | Machine learning-based prediction of Sasang constitution types using comprehensive clinical information and identification of key features for diagnosis |
title_full | Machine learning-based prediction of Sasang constitution types using comprehensive clinical information and identification of key features for diagnosis |
title_fullStr | Machine learning-based prediction of Sasang constitution types using comprehensive clinical information and identification of key features for diagnosis |
title_full_unstemmed | Machine learning-based prediction of Sasang constitution types using comprehensive clinical information and identification of key features for diagnosis |
title_short | Machine learning-based prediction of Sasang constitution types using comprehensive clinical information and identification of key features for diagnosis |
title_sort | machine learning-based prediction of sasang constitution types using comprehensive clinical information and identification of key features for diagnosis |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7903349/ https://www.ncbi.nlm.nih.gov/pubmed/33665087 http://dx.doi.org/10.1016/j.imr.2020.100668 |
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