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Next Generation Sequencing in Cytopathology: Focus on Non-Small Cell Lung Cancer

Molecular cytopathology is a rapidly evolving field embracing both conventional microscopy and molecular pathology. Its growing popularity stems from the fact that in many types of advanced cancers, including non small cell lung cancer (NSCLC), cytological samples often constitute the only available...

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Autores principales: Pisapia, Pasquale, Pepe, Francesco, Iaccarino, Antonino, Sgariglia, Roberta, Nacchio, Mariantonia, Conticelli, Floriana, Salatiello, Maria, Tufano, Rossella, Russo, Gianluca, Gragnano, Gianluca, Girolami, Ilaria, Eccher, Albino, Malapelle, Umberto, Troncone, Giancarlo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7904874/
https://www.ncbi.nlm.nih.gov/pubmed/33644101
http://dx.doi.org/10.3389/fmed.2021.633923
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author Pisapia, Pasquale
Pepe, Francesco
Iaccarino, Antonino
Sgariglia, Roberta
Nacchio, Mariantonia
Conticelli, Floriana
Salatiello, Maria
Tufano, Rossella
Russo, Gianluca
Gragnano, Gianluca
Girolami, Ilaria
Eccher, Albino
Malapelle, Umberto
Troncone, Giancarlo
author_facet Pisapia, Pasquale
Pepe, Francesco
Iaccarino, Antonino
Sgariglia, Roberta
Nacchio, Mariantonia
Conticelli, Floriana
Salatiello, Maria
Tufano, Rossella
Russo, Gianluca
Gragnano, Gianluca
Girolami, Ilaria
Eccher, Albino
Malapelle, Umberto
Troncone, Giancarlo
author_sort Pisapia, Pasquale
collection PubMed
description Molecular cytopathology is a rapidly evolving field embracing both conventional microscopy and molecular pathology. Its growing popularity stems from the fact that in many types of advanced cancers, including non small cell lung cancer (NSCLC), cytological samples often constitute the only available specimens for morphomolecular analysis. Indeed, non formalin fixed and paraffin embedded (FFPE) cytological samples feature a higher quality of extracted nucleic acids than histological specimens. However, because of the growing complexity of molecular testing, several efforts should be made to validate the analytical performance of the wide array of currently available molecular technologies, including next generation sequencing (NGS). This technology has the terrific advantage of allowing simultaneous detection of scores of predictive biomarkers even in low-input DNA/RNA specimens. Here, we briefly review the role of the modern cytopathologist in the morphomolecular diagnosing of advanced stage NSCLC and the adoption of NGS in conventional cytopreparations (cell blocks, direct smears, and liquid-based cytology) and supernatants.
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spelling pubmed-79048742021-02-26 Next Generation Sequencing in Cytopathology: Focus on Non-Small Cell Lung Cancer Pisapia, Pasquale Pepe, Francesco Iaccarino, Antonino Sgariglia, Roberta Nacchio, Mariantonia Conticelli, Floriana Salatiello, Maria Tufano, Rossella Russo, Gianluca Gragnano, Gianluca Girolami, Ilaria Eccher, Albino Malapelle, Umberto Troncone, Giancarlo Front Med (Lausanne) Medicine Molecular cytopathology is a rapidly evolving field embracing both conventional microscopy and molecular pathology. Its growing popularity stems from the fact that in many types of advanced cancers, including non small cell lung cancer (NSCLC), cytological samples often constitute the only available specimens for morphomolecular analysis. Indeed, non formalin fixed and paraffin embedded (FFPE) cytological samples feature a higher quality of extracted nucleic acids than histological specimens. However, because of the growing complexity of molecular testing, several efforts should be made to validate the analytical performance of the wide array of currently available molecular technologies, including next generation sequencing (NGS). This technology has the terrific advantage of allowing simultaneous detection of scores of predictive biomarkers even in low-input DNA/RNA specimens. Here, we briefly review the role of the modern cytopathologist in the morphomolecular diagnosing of advanced stage NSCLC and the adoption of NGS in conventional cytopreparations (cell blocks, direct smears, and liquid-based cytology) and supernatants. Frontiers Media S.A. 2021-02-11 /pmc/articles/PMC7904874/ /pubmed/33644101 http://dx.doi.org/10.3389/fmed.2021.633923 Text en Copyright © 2021 Pisapia, Pepe, Iaccarino, Sgariglia, Nacchio, Conticelli, Salatiello, Tufano, Russo, Gragnano, Girolami, Eccher, Malapelle and Troncone. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Medicine
Pisapia, Pasquale
Pepe, Francesco
Iaccarino, Antonino
Sgariglia, Roberta
Nacchio, Mariantonia
Conticelli, Floriana
Salatiello, Maria
Tufano, Rossella
Russo, Gianluca
Gragnano, Gianluca
Girolami, Ilaria
Eccher, Albino
Malapelle, Umberto
Troncone, Giancarlo
Next Generation Sequencing in Cytopathology: Focus on Non-Small Cell Lung Cancer
title Next Generation Sequencing in Cytopathology: Focus on Non-Small Cell Lung Cancer
title_full Next Generation Sequencing in Cytopathology: Focus on Non-Small Cell Lung Cancer
title_fullStr Next Generation Sequencing in Cytopathology: Focus on Non-Small Cell Lung Cancer
title_full_unstemmed Next Generation Sequencing in Cytopathology: Focus on Non-Small Cell Lung Cancer
title_short Next Generation Sequencing in Cytopathology: Focus on Non-Small Cell Lung Cancer
title_sort next generation sequencing in cytopathology: focus on non-small cell lung cancer
topic Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7904874/
https://www.ncbi.nlm.nih.gov/pubmed/33644101
http://dx.doi.org/10.3389/fmed.2021.633923
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