Cargando…
SLC7A7 is a prognostic biomarker correlated with immune infiltrates in non-small cell lung cancer
BACKGROUND: SLC7A7 (solute carrier family 7, amino acid transporter light chain, y + L system, member 7) is a critical gene in the regulation of cationic amino acid transport. However, the relationships between SLC7A7 and prognosis and tumor-infiltrating lymphocytes in different cancers remain uncle...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7905560/ https://www.ncbi.nlm.nih.gov/pubmed/33632211 http://dx.doi.org/10.1186/s12935-021-01781-7 |
_version_ | 1783655130818674688 |
---|---|
author | Dai, Wumin Feng, Jianguo Hu, Xiao Chen, Yongyi Gu, Qing Gong, Wangang Feng, Tingting Wu, Jie |
author_facet | Dai, Wumin Feng, Jianguo Hu, Xiao Chen, Yongyi Gu, Qing Gong, Wangang Feng, Tingting Wu, Jie |
author_sort | Dai, Wumin |
collection | PubMed |
description | BACKGROUND: SLC7A7 (solute carrier family 7, amino acid transporter light chain, y + L system, member 7) is a critical gene in the regulation of cationic amino acid transport. However, the relationships between SLC7A7 and prognosis and tumor-infiltrating lymphocytes in different cancers remain unclear. METHODS: SLC7A7 expression was analyzed using the Oncomine database and Tumor Immune Estimation Resource (TIMER) site. The enrichment of the GO (Gene Oncology) and KEGG (Kyoto Encyclopedia of Genes and Genomes) pathways was conducted by DAVID. We evaluated the influence of SLC7A7 on clinical prognosis using the PrognoScan database. The functional state of SLC7A7 in various types of cancers was analyzed by CancerSEA. The relationships between SLC7A7 and cancer immune infiltrates was investigated by TIMER. Furthermore, correlations between SLC7A7 expression and gene marker sets of immune infiltrates were analyzed by TIMER and Gene Expression Profiling Interactive Analysis (GEPIA). The expression of SLC7A7 was verified by GEO database and immunohistochemistry. RESULTS: A lung cancer cohort study (GSE31210) showed that high SLC7A7 expression was associated with poor overall survival (OS) and relapse-free survival (RFS). In addition, SLC7A7 had a significant impact on the prognosis of diverse cancers. SLC7A7 expression was positively correlated with infiltrating levels of CD4 + and CD8 + T cells, macrophages, neutrophils and dendritic cells (DCs) in non-small cell lung cancer (NSCLC). SLC7A7 expression was also strongly correlated with various immune marker sets in NSCLC. CONCLUSIONS: These results indicated a role for SLC7A7 in infiltration of CD8 + T cells, CD4 + T cells, tumor-associated macrophages (TAMs), neutrophils and DCs in multiple cancers, and regulation of T cell exhaustion and Tregs in NSCLC. These findings suggest that SLC7A7 could be served as a biomarker for prognosis and immune infiltration in NSCLC. |
format | Online Article Text |
id | pubmed-7905560 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-79055602021-02-25 SLC7A7 is a prognostic biomarker correlated with immune infiltrates in non-small cell lung cancer Dai, Wumin Feng, Jianguo Hu, Xiao Chen, Yongyi Gu, Qing Gong, Wangang Feng, Tingting Wu, Jie Cancer Cell Int Primary Research BACKGROUND: SLC7A7 (solute carrier family 7, amino acid transporter light chain, y + L system, member 7) is a critical gene in the regulation of cationic amino acid transport. However, the relationships between SLC7A7 and prognosis and tumor-infiltrating lymphocytes in different cancers remain unclear. METHODS: SLC7A7 expression was analyzed using the Oncomine database and Tumor Immune Estimation Resource (TIMER) site. The enrichment of the GO (Gene Oncology) and KEGG (Kyoto Encyclopedia of Genes and Genomes) pathways was conducted by DAVID. We evaluated the influence of SLC7A7 on clinical prognosis using the PrognoScan database. The functional state of SLC7A7 in various types of cancers was analyzed by CancerSEA. The relationships between SLC7A7 and cancer immune infiltrates was investigated by TIMER. Furthermore, correlations between SLC7A7 expression and gene marker sets of immune infiltrates were analyzed by TIMER and Gene Expression Profiling Interactive Analysis (GEPIA). The expression of SLC7A7 was verified by GEO database and immunohistochemistry. RESULTS: A lung cancer cohort study (GSE31210) showed that high SLC7A7 expression was associated with poor overall survival (OS) and relapse-free survival (RFS). In addition, SLC7A7 had a significant impact on the prognosis of diverse cancers. SLC7A7 expression was positively correlated with infiltrating levels of CD4 + and CD8 + T cells, macrophages, neutrophils and dendritic cells (DCs) in non-small cell lung cancer (NSCLC). SLC7A7 expression was also strongly correlated with various immune marker sets in NSCLC. CONCLUSIONS: These results indicated a role for SLC7A7 in infiltration of CD8 + T cells, CD4 + T cells, tumor-associated macrophages (TAMs), neutrophils and DCs in multiple cancers, and regulation of T cell exhaustion and Tregs in NSCLC. These findings suggest that SLC7A7 could be served as a biomarker for prognosis and immune infiltration in NSCLC. BioMed Central 2021-02-15 /pmc/articles/PMC7905560/ /pubmed/33632211 http://dx.doi.org/10.1186/s12935-021-01781-7 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Primary Research Dai, Wumin Feng, Jianguo Hu, Xiao Chen, Yongyi Gu, Qing Gong, Wangang Feng, Tingting Wu, Jie SLC7A7 is a prognostic biomarker correlated with immune infiltrates in non-small cell lung cancer |
title | SLC7A7 is a prognostic biomarker correlated with immune infiltrates in non-small cell lung cancer |
title_full | SLC7A7 is a prognostic biomarker correlated with immune infiltrates in non-small cell lung cancer |
title_fullStr | SLC7A7 is a prognostic biomarker correlated with immune infiltrates in non-small cell lung cancer |
title_full_unstemmed | SLC7A7 is a prognostic biomarker correlated with immune infiltrates in non-small cell lung cancer |
title_short | SLC7A7 is a prognostic biomarker correlated with immune infiltrates in non-small cell lung cancer |
title_sort | slc7a7 is a prognostic biomarker correlated with immune infiltrates in non-small cell lung cancer |
topic | Primary Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7905560/ https://www.ncbi.nlm.nih.gov/pubmed/33632211 http://dx.doi.org/10.1186/s12935-021-01781-7 |
work_keys_str_mv | AT daiwumin slc7a7isaprognosticbiomarkercorrelatedwithimmuneinfiltratesinnonsmallcelllungcancer AT fengjianguo slc7a7isaprognosticbiomarkercorrelatedwithimmuneinfiltratesinnonsmallcelllungcancer AT huxiao slc7a7isaprognosticbiomarkercorrelatedwithimmuneinfiltratesinnonsmallcelllungcancer AT chenyongyi slc7a7isaprognosticbiomarkercorrelatedwithimmuneinfiltratesinnonsmallcelllungcancer AT guqing slc7a7isaprognosticbiomarkercorrelatedwithimmuneinfiltratesinnonsmallcelllungcancer AT gongwangang slc7a7isaprognosticbiomarkercorrelatedwithimmuneinfiltratesinnonsmallcelllungcancer AT fengtingting slc7a7isaprognosticbiomarkercorrelatedwithimmuneinfiltratesinnonsmallcelllungcancer AT wujie slc7a7isaprognosticbiomarkercorrelatedwithimmuneinfiltratesinnonsmallcelllungcancer |