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Probing the Effect of Halogen Substituents (Br, Cl, and F) on the Non-covalent Interactions in 1-(Adamantan-1-yl)-3-arylthiourea Derivatives: A Theoretical Study
[Image: see text] The effect of halogen substituents (X = Br, Cl, and F) on the crystal packing and intra- and intermolecular interactions in four adamantane–thiourea hybrid derivatives is investigated using different theoretical tools. The bromo and chloro derivatives exhibit 3D isostructurality as...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7905817/ https://www.ncbi.nlm.nih.gov/pubmed/33644590 http://dx.doi.org/10.1021/acsomega.0c05793 |
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author | Al-Wahaibi, Lamya H. Grandhi, Divya Sri Tawfik, Samar S. Al-Shaalan, Nora H. Elmorsy, Mohammed A. El-Emam, Ali A. Percino, M. Judith Thamotharan, Subbiah |
author_facet | Al-Wahaibi, Lamya H. Grandhi, Divya Sri Tawfik, Samar S. Al-Shaalan, Nora H. Elmorsy, Mohammed A. El-Emam, Ali A. Percino, M. Judith Thamotharan, Subbiah |
author_sort | Al-Wahaibi, Lamya H. |
collection | PubMed |
description | [Image: see text] The effect of halogen substituents (X = Br, Cl, and F) on the crystal packing and intra- and intermolecular interactions in four adamantane–thiourea hybrid derivatives is investigated using different theoretical tools. The bromo and chloro derivatives exhibit 3D isostructurality as evident from lattice parameters, molecular conformation, and crystal packing. The density functional theory study suggests that the molecular conformation of the parent (unsubstituted) and fluoro derivatives exhibits a stable low energy anti–syn conformation. In contrast, bromo and chloro derivatives adopt stable and relatively high energy minima on their potential energy surfaces. Hirshfeld surface analysis reveals the effect of halogen substituents on the intermolecular contacts. The halogen atoms mainly reduce the contribution of H···H contacts toward crystal packing. PIXEL energy analysis indicates the strong dimer formed by N–H···S hydrogen bonds in all four structures. It also revealed that a vast number of H···H contacts observed in different dimers of these structures either presented along with other conventional interactions or solely stabilize the dimeric topology. The topological parameters for intermolecular interactions in these structures suggest an intermediate bonding character between shared and closed-shell interactions for N–H···S hydrogen bonds in the parent and chloro derivatives. In contrast, the N–H···S hydrogen bond in other structures is of a closed-shell interaction. Among four derivatives, the fluoro derivative is weakly packed in the solid state based on the PIXEL method’s lattice energy calculation. |
format | Online Article Text |
id | pubmed-7905817 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-79058172021-02-26 Probing the Effect of Halogen Substituents (Br, Cl, and F) on the Non-covalent Interactions in 1-(Adamantan-1-yl)-3-arylthiourea Derivatives: A Theoretical Study Al-Wahaibi, Lamya H. Grandhi, Divya Sri Tawfik, Samar S. Al-Shaalan, Nora H. Elmorsy, Mohammed A. El-Emam, Ali A. Percino, M. Judith Thamotharan, Subbiah ACS Omega [Image: see text] The effect of halogen substituents (X = Br, Cl, and F) on the crystal packing and intra- and intermolecular interactions in four adamantane–thiourea hybrid derivatives is investigated using different theoretical tools. The bromo and chloro derivatives exhibit 3D isostructurality as evident from lattice parameters, molecular conformation, and crystal packing. The density functional theory study suggests that the molecular conformation of the parent (unsubstituted) and fluoro derivatives exhibits a stable low energy anti–syn conformation. In contrast, bromo and chloro derivatives adopt stable and relatively high energy minima on their potential energy surfaces. Hirshfeld surface analysis reveals the effect of halogen substituents on the intermolecular contacts. The halogen atoms mainly reduce the contribution of H···H contacts toward crystal packing. PIXEL energy analysis indicates the strong dimer formed by N–H···S hydrogen bonds in all four structures. It also revealed that a vast number of H···H contacts observed in different dimers of these structures either presented along with other conventional interactions or solely stabilize the dimeric topology. The topological parameters for intermolecular interactions in these structures suggest an intermediate bonding character between shared and closed-shell interactions for N–H···S hydrogen bonds in the parent and chloro derivatives. In contrast, the N–H···S hydrogen bond in other structures is of a closed-shell interaction. Among four derivatives, the fluoro derivative is weakly packed in the solid state based on the PIXEL method’s lattice energy calculation. American Chemical Society 2021-02-10 /pmc/articles/PMC7905817/ /pubmed/33644590 http://dx.doi.org/10.1021/acsomega.0c05793 Text en © 2021 The Authors. Published by American Chemical Society Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Al-Wahaibi, Lamya H. Grandhi, Divya Sri Tawfik, Samar S. Al-Shaalan, Nora H. Elmorsy, Mohammed A. El-Emam, Ali A. Percino, M. Judith Thamotharan, Subbiah Probing the Effect of Halogen Substituents (Br, Cl, and F) on the Non-covalent Interactions in 1-(Adamantan-1-yl)-3-arylthiourea Derivatives: A Theoretical Study |
title | Probing the Effect of Halogen Substituents (Br, Cl,
and F) on the Non-covalent Interactions in 1-(Adamantan-1-yl)-3-arylthiourea Derivatives: A Theoretical Study |
title_full | Probing the Effect of Halogen Substituents (Br, Cl,
and F) on the Non-covalent Interactions in 1-(Adamantan-1-yl)-3-arylthiourea Derivatives: A Theoretical Study |
title_fullStr | Probing the Effect of Halogen Substituents (Br, Cl,
and F) on the Non-covalent Interactions in 1-(Adamantan-1-yl)-3-arylthiourea Derivatives: A Theoretical Study |
title_full_unstemmed | Probing the Effect of Halogen Substituents (Br, Cl,
and F) on the Non-covalent Interactions in 1-(Adamantan-1-yl)-3-arylthiourea Derivatives: A Theoretical Study |
title_short | Probing the Effect of Halogen Substituents (Br, Cl,
and F) on the Non-covalent Interactions in 1-(Adamantan-1-yl)-3-arylthiourea Derivatives: A Theoretical Study |
title_sort | probing the effect of halogen substituents (br, cl,
and f) on the non-covalent interactions in 1-(adamantan-1-yl)-3-arylthiourea derivatives: a theoretical study |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7905817/ https://www.ncbi.nlm.nih.gov/pubmed/33644590 http://dx.doi.org/10.1021/acsomega.0c05793 |
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