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A novel Foxp3-related immune prognostic signature for glioblastoma multiforme based on immunogenomic profiling

Foxp3(+) regulatory T cells (Treg) play an important part in the glioma immunosuppressive microenvironment. This study analyzed the effect of Foxsp3 on the immune microenvironment and constructed a Foxp3-related immune prognostic signature (IPS)for predicting prognosis in glioblastoma multiforme (GB...

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Autores principales: Guo, Xiao-Yu, Zhang, Guan-Hua, Wang, Zhen-Ning, Duan, Hao, Xie, Tian, Liang, Lun, Cui, Rui, Hu, Hong-Rong, Wu, Yi, Dong, Jia-jun, He, Zhen-Qiang, Mou, Yong-Gao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7906197/
https://www.ncbi.nlm.nih.gov/pubmed/33429364
http://dx.doi.org/10.18632/aging.202282
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author Guo, Xiao-Yu
Zhang, Guan-Hua
Wang, Zhen-Ning
Duan, Hao
Xie, Tian
Liang, Lun
Cui, Rui
Hu, Hong-Rong
Wu, Yi
Dong, Jia-jun
He, Zhen-Qiang
Mou, Yong-Gao
author_facet Guo, Xiao-Yu
Zhang, Guan-Hua
Wang, Zhen-Ning
Duan, Hao
Xie, Tian
Liang, Lun
Cui, Rui
Hu, Hong-Rong
Wu, Yi
Dong, Jia-jun
He, Zhen-Qiang
Mou, Yong-Gao
author_sort Guo, Xiao-Yu
collection PubMed
description Foxp3(+) regulatory T cells (Treg) play an important part in the glioma immunosuppressive microenvironment. This study analyzed the effect of Foxsp3 on the immune microenvironment and constructed a Foxp3-related immune prognostic signature (IPS)for predicting prognosis in glioblastoma multiforme (GBM). Immunohistochemistry (IHC) staining for Foxp3 was performed in 72 high-grade glioma specimens. RNA-seq data from 152 GBM samples were obtained from The Cancer Genome Atlas database (TCGA) and divided into two groups, Foxp3 High (Foxp3_H) and Foxp3 Low (Foxp3_L), based on Foxp3 expression. We systematically analyzed the influence of Foxp3 on the immune microenvironment. Least Absolute Shrinkage and Selection Operator (LASSO) Cox analysis was conducted for immune-related genes that were differentially expressed between Foxp3_H and Foxp3_L GBM patients. We found a differential expression of Foxp3 in high-grade glioma tissues. The presence of Foxp3 was significantly associated with poor OS. From the four-gene IPS developed, GBM patients were stratified into low-risk and high-risk groups in both the training set and validation sets. Furthermore, we developed a novel nomogram to evaluate the overall survival in GBM patients. This study offers innovative insights into the GBM immune microenvironment and these findings contribute to individualized treatment and improvement in the prognosis for GBM patients.
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spelling pubmed-79061972021-03-04 A novel Foxp3-related immune prognostic signature for glioblastoma multiforme based on immunogenomic profiling Guo, Xiao-Yu Zhang, Guan-Hua Wang, Zhen-Ning Duan, Hao Xie, Tian Liang, Lun Cui, Rui Hu, Hong-Rong Wu, Yi Dong, Jia-jun He, Zhen-Qiang Mou, Yong-Gao Aging (Albany NY) Research Paper Foxp3(+) regulatory T cells (Treg) play an important part in the glioma immunosuppressive microenvironment. This study analyzed the effect of Foxsp3 on the immune microenvironment and constructed a Foxp3-related immune prognostic signature (IPS)for predicting prognosis in glioblastoma multiforme (GBM). Immunohistochemistry (IHC) staining for Foxp3 was performed in 72 high-grade glioma specimens. RNA-seq data from 152 GBM samples were obtained from The Cancer Genome Atlas database (TCGA) and divided into two groups, Foxp3 High (Foxp3_H) and Foxp3 Low (Foxp3_L), based on Foxp3 expression. We systematically analyzed the influence of Foxp3 on the immune microenvironment. Least Absolute Shrinkage and Selection Operator (LASSO) Cox analysis was conducted for immune-related genes that were differentially expressed between Foxp3_H and Foxp3_L GBM patients. We found a differential expression of Foxp3 in high-grade glioma tissues. The presence of Foxp3 was significantly associated with poor OS. From the four-gene IPS developed, GBM patients were stratified into low-risk and high-risk groups in both the training set and validation sets. Furthermore, we developed a novel nomogram to evaluate the overall survival in GBM patients. This study offers innovative insights into the GBM immune microenvironment and these findings contribute to individualized treatment and improvement in the prognosis for GBM patients. Impact Journals 2021-01-10 /pmc/articles/PMC7906197/ /pubmed/33429364 http://dx.doi.org/10.18632/aging.202282 Text en Copyright: © 2021 Guo et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Guo, Xiao-Yu
Zhang, Guan-Hua
Wang, Zhen-Ning
Duan, Hao
Xie, Tian
Liang, Lun
Cui, Rui
Hu, Hong-Rong
Wu, Yi
Dong, Jia-jun
He, Zhen-Qiang
Mou, Yong-Gao
A novel Foxp3-related immune prognostic signature for glioblastoma multiforme based on immunogenomic profiling
title A novel Foxp3-related immune prognostic signature for glioblastoma multiforme based on immunogenomic profiling
title_full A novel Foxp3-related immune prognostic signature for glioblastoma multiforme based on immunogenomic profiling
title_fullStr A novel Foxp3-related immune prognostic signature for glioblastoma multiforme based on immunogenomic profiling
title_full_unstemmed A novel Foxp3-related immune prognostic signature for glioblastoma multiforme based on immunogenomic profiling
title_short A novel Foxp3-related immune prognostic signature for glioblastoma multiforme based on immunogenomic profiling
title_sort novel foxp3-related immune prognostic signature for glioblastoma multiforme based on immunogenomic profiling
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7906197/
https://www.ncbi.nlm.nih.gov/pubmed/33429364
http://dx.doi.org/10.18632/aging.202282
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