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A syndromic surveillance tool to detect anomalous clusters of COVID-19 symptoms in the United States

Coronavirus SARS-COV-2 infections continue to spread across the world, yet effective large-scale disease detection and prediction remain limited. COVID Control: A Johns Hopkins University Study, is a novel syndromic surveillance approach, which collects body temperature and COVID-like illness (CLI)...

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Autores principales: Güemes, Amparo, Ray, Soumyajit, Aboumerhi, Khaled, Desjardins, Michael R., Kvit, Anton, Corrigan, Anne E., Fries, Brendan, Shields, Timothy, Stevens, Robert D., Curriero, Frank C., Etienne-Cummings, Ralph
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7907397/
https://www.ncbi.nlm.nih.gov/pubmed/33633250
http://dx.doi.org/10.1038/s41598-021-84145-5
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author Güemes, Amparo
Ray, Soumyajit
Aboumerhi, Khaled
Desjardins, Michael R.
Kvit, Anton
Corrigan, Anne E.
Fries, Brendan
Shields, Timothy
Stevens, Robert D.
Curriero, Frank C.
Etienne-Cummings, Ralph
author_facet Güemes, Amparo
Ray, Soumyajit
Aboumerhi, Khaled
Desjardins, Michael R.
Kvit, Anton
Corrigan, Anne E.
Fries, Brendan
Shields, Timothy
Stevens, Robert D.
Curriero, Frank C.
Etienne-Cummings, Ralph
author_sort Güemes, Amparo
collection PubMed
description Coronavirus SARS-COV-2 infections continue to spread across the world, yet effective large-scale disease detection and prediction remain limited. COVID Control: A Johns Hopkins University Study, is a novel syndromic surveillance approach, which collects body temperature and COVID-like illness (CLI) symptoms across the US using a smartphone app and applies spatio-temporal clustering techniques and cross-correlation analysis to create maps of abnormal symptomatology incidence that are made publicly available. The results of the cross-correlation analysis identify optimal temporal lags between symptoms and a range of COVID-19 outcomes, with new taste/smell loss showing the highest correlations. We also identified temporal clusters of change in taste/smell entries and confirmed COVID-19 incidence in Baltimore City and County. Further, we utilized an extended simulated dataset to showcase our analytics in Maryland. The resulting clusters can serve as indicators of emerging COVID-19 outbreaks, and support syndromic surveillance as an early warning system for disease prevention and control.
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spelling pubmed-79073972021-03-02 A syndromic surveillance tool to detect anomalous clusters of COVID-19 symptoms in the United States Güemes, Amparo Ray, Soumyajit Aboumerhi, Khaled Desjardins, Michael R. Kvit, Anton Corrigan, Anne E. Fries, Brendan Shields, Timothy Stevens, Robert D. Curriero, Frank C. Etienne-Cummings, Ralph Sci Rep Article Coronavirus SARS-COV-2 infections continue to spread across the world, yet effective large-scale disease detection and prediction remain limited. COVID Control: A Johns Hopkins University Study, is a novel syndromic surveillance approach, which collects body temperature and COVID-like illness (CLI) symptoms across the US using a smartphone app and applies spatio-temporal clustering techniques and cross-correlation analysis to create maps of abnormal symptomatology incidence that are made publicly available. The results of the cross-correlation analysis identify optimal temporal lags between symptoms and a range of COVID-19 outcomes, with new taste/smell loss showing the highest correlations. We also identified temporal clusters of change in taste/smell entries and confirmed COVID-19 incidence in Baltimore City and County. Further, we utilized an extended simulated dataset to showcase our analytics in Maryland. The resulting clusters can serve as indicators of emerging COVID-19 outbreaks, and support syndromic surveillance as an early warning system for disease prevention and control. Nature Publishing Group UK 2021-02-25 /pmc/articles/PMC7907397/ /pubmed/33633250 http://dx.doi.org/10.1038/s41598-021-84145-5 Text en © The Author(s) 2021, corrected publication 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Güemes, Amparo
Ray, Soumyajit
Aboumerhi, Khaled
Desjardins, Michael R.
Kvit, Anton
Corrigan, Anne E.
Fries, Brendan
Shields, Timothy
Stevens, Robert D.
Curriero, Frank C.
Etienne-Cummings, Ralph
A syndromic surveillance tool to detect anomalous clusters of COVID-19 symptoms in the United States
title A syndromic surveillance tool to detect anomalous clusters of COVID-19 symptoms in the United States
title_full A syndromic surveillance tool to detect anomalous clusters of COVID-19 symptoms in the United States
title_fullStr A syndromic surveillance tool to detect anomalous clusters of COVID-19 symptoms in the United States
title_full_unstemmed A syndromic surveillance tool to detect anomalous clusters of COVID-19 symptoms in the United States
title_short A syndromic surveillance tool to detect anomalous clusters of COVID-19 symptoms in the United States
title_sort syndromic surveillance tool to detect anomalous clusters of covid-19 symptoms in the united states
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7907397/
https://www.ncbi.nlm.nih.gov/pubmed/33633250
http://dx.doi.org/10.1038/s41598-021-84145-5
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