Cargando…
Validating Differential Volatilome Profiles in Parkinson’s Disease
[Image: see text] Parkinson’s disease (PD) is a progressive neurodegenerative disorder that does not currently have a robust clinical diagnostic test. Nonmotor symptoms such as skin disorders have long since been associated with the disease, and more recently a characteristic odor emanating from the...
Autores principales: | , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2021
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7908024/ https://www.ncbi.nlm.nih.gov/pubmed/33655068 http://dx.doi.org/10.1021/acscentsci.0c01028 |
_version_ | 1783655618383446016 |
---|---|
author | Sinclair, Eleanor Walton-Doyle, Caitlin Sarkar, Depanjan Hollywood, Katherine A. Milne, Joy Lim, Sze Hway Kunath, Tilo Rijs, Anouk M. de Bie, Rob M. A. Silverdale, Monty Trivedi, Drupad K. Barran, Perdita |
author_facet | Sinclair, Eleanor Walton-Doyle, Caitlin Sarkar, Depanjan Hollywood, Katherine A. Milne, Joy Lim, Sze Hway Kunath, Tilo Rijs, Anouk M. de Bie, Rob M. A. Silverdale, Monty Trivedi, Drupad K. Barran, Perdita |
author_sort | Sinclair, Eleanor |
collection | PubMed |
description | [Image: see text] Parkinson’s disease (PD) is a progressive neurodegenerative disorder that does not currently have a robust clinical diagnostic test. Nonmotor symptoms such as skin disorders have long since been associated with the disease, and more recently a characteristic odor emanating from the skin of people with Parkinson’s has been identified. Here, dynamic head space (DHS) thermal desorption (TD) gas chromatography–mass spectrometry (GC-MS) is implemented to directly measure the volatile components of sebum on swabs sampled from people with Parkinson’s—both drug naïve and those on PD medications (n = 100) and control subjects (n = 29). Supervised multivariate analyses of data showed 84.4% correct classification of PD cases using all detected volatile compounds. Variable importance in projection (VIP) scores were generated from these data, which revealed eight features with VIP > 1 and p < 0.05 which all presented a downregulation within the control cohorts. Purified standards based on previously annotated analytes of interest eicosane and octadecanal did not match to patient sample data, although multiple metabolite features are annotated with these compounds all with high spectral matches indicating the presence of a series of similar structured species. DHS-TD-GC-MS analysis of a range of lipid standards has revealed the presence of common hydrocarbon species rather than differentiated intact compounds which are hypothesized to be breakdown products of lipids. This replication study validates that a differential volatile profile between control and PD cohorts can be measured using an analytical method that measures volatile compounds directly from skin swabs. |
format | Online Article Text |
id | pubmed-7908024 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-79080242021-03-01 Validating Differential Volatilome Profiles in Parkinson’s Disease Sinclair, Eleanor Walton-Doyle, Caitlin Sarkar, Depanjan Hollywood, Katherine A. Milne, Joy Lim, Sze Hway Kunath, Tilo Rijs, Anouk M. de Bie, Rob M. A. Silverdale, Monty Trivedi, Drupad K. Barran, Perdita ACS Cent Sci [Image: see text] Parkinson’s disease (PD) is a progressive neurodegenerative disorder that does not currently have a robust clinical diagnostic test. Nonmotor symptoms such as skin disorders have long since been associated with the disease, and more recently a characteristic odor emanating from the skin of people with Parkinson’s has been identified. Here, dynamic head space (DHS) thermal desorption (TD) gas chromatography–mass spectrometry (GC-MS) is implemented to directly measure the volatile components of sebum on swabs sampled from people with Parkinson’s—both drug naïve and those on PD medications (n = 100) and control subjects (n = 29). Supervised multivariate analyses of data showed 84.4% correct classification of PD cases using all detected volatile compounds. Variable importance in projection (VIP) scores were generated from these data, which revealed eight features with VIP > 1 and p < 0.05 which all presented a downregulation within the control cohorts. Purified standards based on previously annotated analytes of interest eicosane and octadecanal did not match to patient sample data, although multiple metabolite features are annotated with these compounds all with high spectral matches indicating the presence of a series of similar structured species. DHS-TD-GC-MS analysis of a range of lipid standards has revealed the presence of common hydrocarbon species rather than differentiated intact compounds which are hypothesized to be breakdown products of lipids. This replication study validates that a differential volatile profile between control and PD cohorts can be measured using an analytical method that measures volatile compounds directly from skin swabs. American Chemical Society 2021-02-12 2021-02-24 /pmc/articles/PMC7908024/ /pubmed/33655068 http://dx.doi.org/10.1021/acscentsci.0c01028 Text en © 2021 The Authors. Published by American Chemical Society Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Sinclair, Eleanor Walton-Doyle, Caitlin Sarkar, Depanjan Hollywood, Katherine A. Milne, Joy Lim, Sze Hway Kunath, Tilo Rijs, Anouk M. de Bie, Rob M. A. Silverdale, Monty Trivedi, Drupad K. Barran, Perdita Validating Differential Volatilome Profiles in Parkinson’s Disease |
title | Validating Differential Volatilome Profiles in Parkinson’s
Disease |
title_full | Validating Differential Volatilome Profiles in Parkinson’s
Disease |
title_fullStr | Validating Differential Volatilome Profiles in Parkinson’s
Disease |
title_full_unstemmed | Validating Differential Volatilome Profiles in Parkinson’s
Disease |
title_short | Validating Differential Volatilome Profiles in Parkinson’s
Disease |
title_sort | validating differential volatilome profiles in parkinson’s
disease |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7908024/ https://www.ncbi.nlm.nih.gov/pubmed/33655068 http://dx.doi.org/10.1021/acscentsci.0c01028 |
work_keys_str_mv | AT sinclaireleanor validatingdifferentialvolatilomeprofilesinparkinsonsdisease AT waltondoylecaitlin validatingdifferentialvolatilomeprofilesinparkinsonsdisease AT sarkardepanjan validatingdifferentialvolatilomeprofilesinparkinsonsdisease AT hollywoodkatherinea validatingdifferentialvolatilomeprofilesinparkinsonsdisease AT milnejoy validatingdifferentialvolatilomeprofilesinparkinsonsdisease AT limszehway validatingdifferentialvolatilomeprofilesinparkinsonsdisease AT kunathtilo validatingdifferentialvolatilomeprofilesinparkinsonsdisease AT rijsanoukm validatingdifferentialvolatilomeprofilesinparkinsonsdisease AT debierobma validatingdifferentialvolatilomeprofilesinparkinsonsdisease AT silverdalemonty validatingdifferentialvolatilomeprofilesinparkinsonsdisease AT trivedidrupadk validatingdifferentialvolatilomeprofilesinparkinsonsdisease AT barranperdita validatingdifferentialvolatilomeprofilesinparkinsonsdisease |