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Comparison between cultured and wild Pacific white shrimp (Penaeus vannamei) vitellogenesis: next-generation sequencing and relative expression of genes directly and indirectly related to reproduction

Shrimp fisheries are among the most important fisheries worldwide, and shrimp culture has increased considerably in recent years. Most current studies on reproduction-related genes have been conducted on cultured shrimp. However, gene expression is intimately linked to physiological and environmenta...

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Autores principales: Montes-Dominguez, Araceli Lorena, Avena-Soto, Jesus Arian, Lizarraga-Rodriguez, Jorge Luis, Perez-Gala, Rodrigo de Jesus, Jimenez-Gutierrez, Stephanie, Sotelo-Falomir, Jesus Alberto, Pinzon-Miranda, Fernando Marino, Martinez-Perez, Francisco, Muñoz-Rubi, Horacio Alberto, Chavez-Herrera, Dario, Jimenez-Gutierrez, Laura Rebeca
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7908874/
https://www.ncbi.nlm.nih.gov/pubmed/33665004
http://dx.doi.org/10.7717/peerj.10694
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author Montes-Dominguez, Araceli Lorena
Avena-Soto, Jesus Arian
Lizarraga-Rodriguez, Jorge Luis
Perez-Gala, Rodrigo de Jesus
Jimenez-Gutierrez, Stephanie
Sotelo-Falomir, Jesus Alberto
Pinzon-Miranda, Fernando Marino
Martinez-Perez, Francisco
Muñoz-Rubi, Horacio Alberto
Chavez-Herrera, Dario
Jimenez-Gutierrez, Laura Rebeca
author_facet Montes-Dominguez, Araceli Lorena
Avena-Soto, Jesus Arian
Lizarraga-Rodriguez, Jorge Luis
Perez-Gala, Rodrigo de Jesus
Jimenez-Gutierrez, Stephanie
Sotelo-Falomir, Jesus Alberto
Pinzon-Miranda, Fernando Marino
Martinez-Perez, Francisco
Muñoz-Rubi, Horacio Alberto
Chavez-Herrera, Dario
Jimenez-Gutierrez, Laura Rebeca
author_sort Montes-Dominguez, Araceli Lorena
collection PubMed
description Shrimp fisheries are among the most important fisheries worldwide, and shrimp culture has increased considerably in recent years. Most current studies on reproduction-related genes have been conducted on cultured shrimp. However, gene expression is intimately linked to physiological and environmental conditions, and therefore an organism’s growth environment has a great influence on reproduction. Thus, gene expression profiling, should be applied in fisheries studies. Here, we identified the expression patterns of 76 reproduction-related genes in P. vannamei via the analysis of pooled transcriptomes from a time-series experiment encompassing a full circadian cycle. The expression patterns of genes associated both directly (Vtg, ODP, and ProR) and indirectly (FAMet, CruA1, and CruC1) with reproduction were evaluated, as these genes could be used as molecular markers of previtellogenic and vitellogenic maturation stages. The evaluated genes were prominently upregulated during vitellogenic stages, with specific expression patterns depending on the organism’s environment, diet, and season. Vtg, ProR, ODP, and FaMet could serve as molecular markers for both wild and cultured organisms.
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spelling pubmed-79088742021-03-03 Comparison between cultured and wild Pacific white shrimp (Penaeus vannamei) vitellogenesis: next-generation sequencing and relative expression of genes directly and indirectly related to reproduction Montes-Dominguez, Araceli Lorena Avena-Soto, Jesus Arian Lizarraga-Rodriguez, Jorge Luis Perez-Gala, Rodrigo de Jesus Jimenez-Gutierrez, Stephanie Sotelo-Falomir, Jesus Alberto Pinzon-Miranda, Fernando Marino Martinez-Perez, Francisco Muñoz-Rubi, Horacio Alberto Chavez-Herrera, Dario Jimenez-Gutierrez, Laura Rebeca PeerJ Aquaculture, Fisheries and Fish Science Shrimp fisheries are among the most important fisheries worldwide, and shrimp culture has increased considerably in recent years. Most current studies on reproduction-related genes have been conducted on cultured shrimp. However, gene expression is intimately linked to physiological and environmental conditions, and therefore an organism’s growth environment has a great influence on reproduction. Thus, gene expression profiling, should be applied in fisheries studies. Here, we identified the expression patterns of 76 reproduction-related genes in P. vannamei via the analysis of pooled transcriptomes from a time-series experiment encompassing a full circadian cycle. The expression patterns of genes associated both directly (Vtg, ODP, and ProR) and indirectly (FAMet, CruA1, and CruC1) with reproduction were evaluated, as these genes could be used as molecular markers of previtellogenic and vitellogenic maturation stages. The evaluated genes were prominently upregulated during vitellogenic stages, with specific expression patterns depending on the organism’s environment, diet, and season. Vtg, ProR, ODP, and FaMet could serve as molecular markers for both wild and cultured organisms. PeerJ Inc. 2021-02-23 /pmc/articles/PMC7908874/ /pubmed/33665004 http://dx.doi.org/10.7717/peerj.10694 Text en ©2021 Montes-Dominguez et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Aquaculture, Fisheries and Fish Science
Montes-Dominguez, Araceli Lorena
Avena-Soto, Jesus Arian
Lizarraga-Rodriguez, Jorge Luis
Perez-Gala, Rodrigo de Jesus
Jimenez-Gutierrez, Stephanie
Sotelo-Falomir, Jesus Alberto
Pinzon-Miranda, Fernando Marino
Martinez-Perez, Francisco
Muñoz-Rubi, Horacio Alberto
Chavez-Herrera, Dario
Jimenez-Gutierrez, Laura Rebeca
Comparison between cultured and wild Pacific white shrimp (Penaeus vannamei) vitellogenesis: next-generation sequencing and relative expression of genes directly and indirectly related to reproduction
title Comparison between cultured and wild Pacific white shrimp (Penaeus vannamei) vitellogenesis: next-generation sequencing and relative expression of genes directly and indirectly related to reproduction
title_full Comparison between cultured and wild Pacific white shrimp (Penaeus vannamei) vitellogenesis: next-generation sequencing and relative expression of genes directly and indirectly related to reproduction
title_fullStr Comparison between cultured and wild Pacific white shrimp (Penaeus vannamei) vitellogenesis: next-generation sequencing and relative expression of genes directly and indirectly related to reproduction
title_full_unstemmed Comparison between cultured and wild Pacific white shrimp (Penaeus vannamei) vitellogenesis: next-generation sequencing and relative expression of genes directly and indirectly related to reproduction
title_short Comparison between cultured and wild Pacific white shrimp (Penaeus vannamei) vitellogenesis: next-generation sequencing and relative expression of genes directly and indirectly related to reproduction
title_sort comparison between cultured and wild pacific white shrimp (penaeus vannamei) vitellogenesis: next-generation sequencing and relative expression of genes directly and indirectly related to reproduction
topic Aquaculture, Fisheries and Fish Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7908874/
https://www.ncbi.nlm.nih.gov/pubmed/33665004
http://dx.doi.org/10.7717/peerj.10694
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