Complete Genome Sequence of Escherichia coli Strain FEX669, a ColV Plasmid-Containing Isolate from Retail Chicken Meat

Escherichia coli strain FEX669 was isolated from retail ground chicken and shown to contain the extraintestinal pathogenic E. coli (ExPEC) virulence genes sfaD, focC, and iutA. Because this presumptive ExPEC strain was isolated from a retail food item and it was a weak biofilm former, it was charact...

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Autores principales: Elder, Jacob R., Liu, Yanhong, Kanrar, Siddhartha, Gehring, Andrew, Xu, Aixia, Sommers, Christopher H., Johnston, Brian D., Johnson, James R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2021
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7909090/
https://www.ncbi.nlm.nih.gov/pubmed/33632865
http://dx.doi.org/10.1128/MRA.01340-20
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author Elder, Jacob R.
Liu, Yanhong
Kanrar, Siddhartha
Gehring, Andrew
Xu, Aixia
Sommers, Christopher H.
Johnston, Brian D.
Johnson, James R.
author_facet Elder, Jacob R.
Liu, Yanhong
Kanrar, Siddhartha
Gehring, Andrew
Xu, Aixia
Sommers, Christopher H.
Johnston, Brian D.
Johnson, James R.
author_sort Elder, Jacob R.
collection PubMed
description Escherichia coli strain FEX669 was isolated from retail ground chicken and shown to contain the extraintestinal pathogenic E. coli (ExPEC) virulence genes sfaD, focC, and iutA. Because this presumptive ExPEC strain was isolated from a retail food item and it was a weak biofilm former, it was characterized using whole-genome sequencing using the PacBio RS II platform. Genomic analysis showed that the FEX669 chromosome is 4,973,943 bp long, with a GC content of 50.47%, and is accompanied by a ColV plasmid that is 237,102 bp long, with a GC content of 50.49%.
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spelling pubmed-79090902021-03-10 Complete Genome Sequence of Escherichia coli Strain FEX669, a ColV Plasmid-Containing Isolate from Retail Chicken Meat Elder, Jacob R. Liu, Yanhong Kanrar, Siddhartha Gehring, Andrew Xu, Aixia Sommers, Christopher H. Johnston, Brian D. Johnson, James R. Microbiol Resour Announc Genome Sequences Escherichia coli strain FEX669 was isolated from retail ground chicken and shown to contain the extraintestinal pathogenic E. coli (ExPEC) virulence genes sfaD, focC, and iutA. Because this presumptive ExPEC strain was isolated from a retail food item and it was a weak biofilm former, it was characterized using whole-genome sequencing using the PacBio RS II platform. Genomic analysis showed that the FEX669 chromosome is 4,973,943 bp long, with a GC content of 50.47%, and is accompanied by a ColV plasmid that is 237,102 bp long, with a GC content of 50.49%. American Society for Microbiology 2021-02-25 /pmc/articles/PMC7909090/ /pubmed/33632865 http://dx.doi.org/10.1128/MRA.01340-20 Text en https://doi.org/10.1128/AuthorWarrantyLicense.v1 This is a work of the U.S. Government and is not subject to copyright protection in the United States. Foreign copyrights may apply.
spellingShingle Genome Sequences
Elder, Jacob R.
Liu, Yanhong
Kanrar, Siddhartha
Gehring, Andrew
Xu, Aixia
Sommers, Christopher H.
Johnston, Brian D.
Johnson, James R.
Complete Genome Sequence of Escherichia coli Strain FEX669, a ColV Plasmid-Containing Isolate from Retail Chicken Meat
title Complete Genome Sequence of Escherichia coli Strain FEX669, a ColV Plasmid-Containing Isolate from Retail Chicken Meat
title_full Complete Genome Sequence of Escherichia coli Strain FEX669, a ColV Plasmid-Containing Isolate from Retail Chicken Meat
title_fullStr Complete Genome Sequence of Escherichia coli Strain FEX669, a ColV Plasmid-Containing Isolate from Retail Chicken Meat
title_full_unstemmed Complete Genome Sequence of Escherichia coli Strain FEX669, a ColV Plasmid-Containing Isolate from Retail Chicken Meat
title_short Complete Genome Sequence of Escherichia coli Strain FEX669, a ColV Plasmid-Containing Isolate from Retail Chicken Meat
title_sort complete genome sequence of escherichia coli strain fex669, a colv plasmid-containing isolate from retail chicken meat
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7909090/
https://www.ncbi.nlm.nih.gov/pubmed/33632865
http://dx.doi.org/10.1128/MRA.01340-20
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