Cargando…
A novel d-xylose isomerase from the gut of the wood feeding beetle Odontotaenius disjunctus efficiently expressed in Saccharomyces cerevisiae
Carbohydrate rich substrates such as lignocellulosic hydrolysates remain one of the primary sources of potentially renewable fuel and bulk chemicals. The pentose sugar d-xylose is often present in significant amounts along with hexoses. Saccharomyces cerevisiae can acquire the ability to metabolize...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7910561/ https://www.ncbi.nlm.nih.gov/pubmed/33637780 http://dx.doi.org/10.1038/s41598-021-83937-z |
_version_ | 1783656144620748800 |
---|---|
author | Silva, Paulo César Ceja-Navarro, Javier A. Azevedo, Flávio Karaoz, Ulas Brodie, Eoin L. Johansson, Björn |
author_facet | Silva, Paulo César Ceja-Navarro, Javier A. Azevedo, Flávio Karaoz, Ulas Brodie, Eoin L. Johansson, Björn |
author_sort | Silva, Paulo César |
collection | PubMed |
description | Carbohydrate rich substrates such as lignocellulosic hydrolysates remain one of the primary sources of potentially renewable fuel and bulk chemicals. The pentose sugar d-xylose is often present in significant amounts along with hexoses. Saccharomyces cerevisiae can acquire the ability to metabolize d-xylose through expression of heterologous d-xylose isomerase (XI). This enzyme is notoriously difficult to express in S. cerevisiae and only fourteen XIs have been reported to be active so far. We cloned a new d-xylose isomerase derived from microorganisms in the gut of the wood-feeding beetle Odontotaenius disjunctus. Although somewhat homologous to the XI from Piromyces sp. E2, the new gene was identified as bacterial in origin and the host as a Parabacteroides sp. Expression of the new XI in S. cerevisiae resulted in faster aerobic growth than the XI from Piromyces on d-xylose media. The d-xylose isomerization rate conferred by the new XI was also 72% higher, while absolute xylitol production was identical in both strains. Interestingly, increasing concentrations of xylitol (up to 8 g L(−1)) appeared not to inhibit d-xylose consumption. The newly described XI displayed 2.6 times higher specific activity, 37% lower K(M) for d-xylose, and exhibited higher activity over a broader temperature range, retaining 51% of maximal activity at 30 °C compared with only 29% activity for the Piromyces XI. |
format | Online Article Text |
id | pubmed-7910561 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-79105612021-03-02 A novel d-xylose isomerase from the gut of the wood feeding beetle Odontotaenius disjunctus efficiently expressed in Saccharomyces cerevisiae Silva, Paulo César Ceja-Navarro, Javier A. Azevedo, Flávio Karaoz, Ulas Brodie, Eoin L. Johansson, Björn Sci Rep Article Carbohydrate rich substrates such as lignocellulosic hydrolysates remain one of the primary sources of potentially renewable fuel and bulk chemicals. The pentose sugar d-xylose is often present in significant amounts along with hexoses. Saccharomyces cerevisiae can acquire the ability to metabolize d-xylose through expression of heterologous d-xylose isomerase (XI). This enzyme is notoriously difficult to express in S. cerevisiae and only fourteen XIs have been reported to be active so far. We cloned a new d-xylose isomerase derived from microorganisms in the gut of the wood-feeding beetle Odontotaenius disjunctus. Although somewhat homologous to the XI from Piromyces sp. E2, the new gene was identified as bacterial in origin and the host as a Parabacteroides sp. Expression of the new XI in S. cerevisiae resulted in faster aerobic growth than the XI from Piromyces on d-xylose media. The d-xylose isomerization rate conferred by the new XI was also 72% higher, while absolute xylitol production was identical in both strains. Interestingly, increasing concentrations of xylitol (up to 8 g L(−1)) appeared not to inhibit d-xylose consumption. The newly described XI displayed 2.6 times higher specific activity, 37% lower K(M) for d-xylose, and exhibited higher activity over a broader temperature range, retaining 51% of maximal activity at 30 °C compared with only 29% activity for the Piromyces XI. Nature Publishing Group UK 2021-02-26 /pmc/articles/PMC7910561/ /pubmed/33637780 http://dx.doi.org/10.1038/s41598-021-83937-z Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Silva, Paulo César Ceja-Navarro, Javier A. Azevedo, Flávio Karaoz, Ulas Brodie, Eoin L. Johansson, Björn A novel d-xylose isomerase from the gut of the wood feeding beetle Odontotaenius disjunctus efficiently expressed in Saccharomyces cerevisiae |
title | A novel d-xylose isomerase from the gut of the wood feeding beetle Odontotaenius disjunctus efficiently expressed in Saccharomyces cerevisiae |
title_full | A novel d-xylose isomerase from the gut of the wood feeding beetle Odontotaenius disjunctus efficiently expressed in Saccharomyces cerevisiae |
title_fullStr | A novel d-xylose isomerase from the gut of the wood feeding beetle Odontotaenius disjunctus efficiently expressed in Saccharomyces cerevisiae |
title_full_unstemmed | A novel d-xylose isomerase from the gut of the wood feeding beetle Odontotaenius disjunctus efficiently expressed in Saccharomyces cerevisiae |
title_short | A novel d-xylose isomerase from the gut of the wood feeding beetle Odontotaenius disjunctus efficiently expressed in Saccharomyces cerevisiae |
title_sort | novel d-xylose isomerase from the gut of the wood feeding beetle odontotaenius disjunctus efficiently expressed in saccharomyces cerevisiae |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7910561/ https://www.ncbi.nlm.nih.gov/pubmed/33637780 http://dx.doi.org/10.1038/s41598-021-83937-z |
work_keys_str_mv | AT silvapaulocesar anoveldxyloseisomerasefromthegutofthewoodfeedingbeetleodontotaeniusdisjunctusefficientlyexpressedinsaccharomycescerevisiae AT cejanavarrojaviera anoveldxyloseisomerasefromthegutofthewoodfeedingbeetleodontotaeniusdisjunctusefficientlyexpressedinsaccharomycescerevisiae AT azevedoflavio anoveldxyloseisomerasefromthegutofthewoodfeedingbeetleodontotaeniusdisjunctusefficientlyexpressedinsaccharomycescerevisiae AT karaozulas anoveldxyloseisomerasefromthegutofthewoodfeedingbeetleodontotaeniusdisjunctusefficientlyexpressedinsaccharomycescerevisiae AT brodieeoinl anoveldxyloseisomerasefromthegutofthewoodfeedingbeetleodontotaeniusdisjunctusefficientlyexpressedinsaccharomycescerevisiae AT johanssonbjorn anoveldxyloseisomerasefromthegutofthewoodfeedingbeetleodontotaeniusdisjunctusefficientlyexpressedinsaccharomycescerevisiae AT silvapaulocesar noveldxyloseisomerasefromthegutofthewoodfeedingbeetleodontotaeniusdisjunctusefficientlyexpressedinsaccharomycescerevisiae AT cejanavarrojaviera noveldxyloseisomerasefromthegutofthewoodfeedingbeetleodontotaeniusdisjunctusefficientlyexpressedinsaccharomycescerevisiae AT azevedoflavio noveldxyloseisomerasefromthegutofthewoodfeedingbeetleodontotaeniusdisjunctusefficientlyexpressedinsaccharomycescerevisiae AT karaozulas noveldxyloseisomerasefromthegutofthewoodfeedingbeetleodontotaeniusdisjunctusefficientlyexpressedinsaccharomycescerevisiae AT brodieeoinl noveldxyloseisomerasefromthegutofthewoodfeedingbeetleodontotaeniusdisjunctusefficientlyexpressedinsaccharomycescerevisiae AT johanssonbjorn noveldxyloseisomerasefromthegutofthewoodfeedingbeetleodontotaeniusdisjunctusefficientlyexpressedinsaccharomycescerevisiae |