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Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities

Cryptoendolithic communities are almost the sole life form in the ice-free areas of the Antarctic desert, encompassing among the most extreme-tolerant organisms known on Earth that still assure ecosystems functioning, regulating nutrient and biogeochemical cycles under conditions accounted as incomp...

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Autores principales: Fanelli, Giuseppina, Coleine, Claudia, Gevi, Federica, Onofri, Silvano, Selbmann, Laura, Timperio, Anna Maria
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7911838/
https://www.ncbi.nlm.nih.gov/pubmed/33514042
http://dx.doi.org/10.3390/life11020096
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author Fanelli, Giuseppina
Coleine, Claudia
Gevi, Federica
Onofri, Silvano
Selbmann, Laura
Timperio, Anna Maria
author_facet Fanelli, Giuseppina
Coleine, Claudia
Gevi, Federica
Onofri, Silvano
Selbmann, Laura
Timperio, Anna Maria
author_sort Fanelli, Giuseppina
collection PubMed
description Cryptoendolithic communities are almost the sole life form in the ice-free areas of the Antarctic desert, encompassing among the most extreme-tolerant organisms known on Earth that still assure ecosystems functioning, regulating nutrient and biogeochemical cycles under conditions accounted as incompatible with active life. If high-throughput sequencing based studies are unravelling prokaryotic and eukaryotic diversity, they are not yet characterized in terms of stress adaptations and responses, despite their paramount ecological importance. In this study, we compared the responses of Antarctic endolithic communities, with special focus on fungi, both under dry conditions (i.e., when dormant), and after reanimation by wetting, light, and optimal temperature (15 °C). We found that several metabolites were differently expressed in reanimated opposite sun exposed communities, suggesting a critical role in their success. In particular, the saccharopine pathway was up-regulated in the north surface, while the spermine/spermidine pathway was significantly down-regulated in the shaded exposed communities. The carnitine-dependent pathway is up-regulated in south-exposed reanimated samples, indicating the preferential involvement of the B-oxidation for the functioning of TCA cycle. The role of these metabolites in the performance of the communities is discussed herein.
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spelling pubmed-79118382021-02-28 Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities Fanelli, Giuseppina Coleine, Claudia Gevi, Federica Onofri, Silvano Selbmann, Laura Timperio, Anna Maria Life (Basel) Article Cryptoendolithic communities are almost the sole life form in the ice-free areas of the Antarctic desert, encompassing among the most extreme-tolerant organisms known on Earth that still assure ecosystems functioning, regulating nutrient and biogeochemical cycles under conditions accounted as incompatible with active life. If high-throughput sequencing based studies are unravelling prokaryotic and eukaryotic diversity, they are not yet characterized in terms of stress adaptations and responses, despite their paramount ecological importance. In this study, we compared the responses of Antarctic endolithic communities, with special focus on fungi, both under dry conditions (i.e., when dormant), and after reanimation by wetting, light, and optimal temperature (15 °C). We found that several metabolites were differently expressed in reanimated opposite sun exposed communities, suggesting a critical role in their success. In particular, the saccharopine pathway was up-regulated in the north surface, while the spermine/spermidine pathway was significantly down-regulated in the shaded exposed communities. The carnitine-dependent pathway is up-regulated in south-exposed reanimated samples, indicating the preferential involvement of the B-oxidation for the functioning of TCA cycle. The role of these metabolites in the performance of the communities is discussed herein. MDPI 2021-01-27 /pmc/articles/PMC7911838/ /pubmed/33514042 http://dx.doi.org/10.3390/life11020096 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Fanelli, Giuseppina
Coleine, Claudia
Gevi, Federica
Onofri, Silvano
Selbmann, Laura
Timperio, Anna Maria
Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities
title Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities
title_full Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities
title_fullStr Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities
title_full_unstemmed Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities
title_short Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities
title_sort metabolomics of dry versus reanimated antarctic lichen-dominated endolithic communities
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7911838/
https://www.ncbi.nlm.nih.gov/pubmed/33514042
http://dx.doi.org/10.3390/life11020096
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