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Deviation of Trypsin Activity Using Peptide Conformational Imprints

In this study, a methodology utilizing peptide conformational imprints (PCIs) as a tool to specifically immobilize porcine pancreatic alpha-trypsin (PPT) at a targeted position is demonstrated. Owing to the fabrication of segment-mediated PCIs on the magnetic particles (PCIMPs), elegant cavities com...

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Autores principales: Kanubaddi, Kiran Reddy, Huang, Pei-Yu, Chang, Ya-Lin, Wu, Cheng Hsin, Li, Wei, Kankala, Ranjith Kumar, Tai, Dar-Fu, Lee, Chia-Hung
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7911952/
https://www.ncbi.nlm.nih.gov/pubmed/33513990
http://dx.doi.org/10.3390/nano11020334
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author Kanubaddi, Kiran Reddy
Huang, Pei-Yu
Chang, Ya-Lin
Wu, Cheng Hsin
Li, Wei
Kankala, Ranjith Kumar
Tai, Dar-Fu
Lee, Chia-Hung
author_facet Kanubaddi, Kiran Reddy
Huang, Pei-Yu
Chang, Ya-Lin
Wu, Cheng Hsin
Li, Wei
Kankala, Ranjith Kumar
Tai, Dar-Fu
Lee, Chia-Hung
author_sort Kanubaddi, Kiran Reddy
collection PubMed
description In this study, a methodology utilizing peptide conformational imprints (PCIs) as a tool to specifically immobilize porcine pancreatic alpha-trypsin (PPT) at a targeted position is demonstrated. Owing to the fabrication of segment-mediated PCIs on the magnetic particles (PCIMPs), elegant cavities complementary to the PPT structure are constructed. Based on the sequence on targeted PPT, the individual region of the enzyme is trapped with different template-derived PCIMPs to show certain types of inhibition. Upon hydrolysis, N-benzoyl-L-arginine ethyl ester (BAEE) is employed to assess the hydrolytic activity of PCIMPs bound to the trypsin using high-performance liquid chromatography (HPLC) analysis. Further, the kinetic data of four different PCIMPs are compared. As a result, the PCIMPs presented non-competitive inhibition toward trypsin, according to the Lineweaver-Burk plot. Further, the kinetic analysis confirmed that the best parameters of PPT/PCIMPs (233–245+G) were V(max) = 1.47 × 10(−3) mM s(−1), K(m) = 0.42 mM, k(cat) = 1.16 s(−1), and k(cat)/K(m) = 2.79 mM(−1) s(−1). As PPT is bound tightly to the correct position, its catalytic activities could be sustained. Additionally, our findings stated that the immobilized PPT could maintain stable activity even after four successive cycles.
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spelling pubmed-79119522021-02-28 Deviation of Trypsin Activity Using Peptide Conformational Imprints Kanubaddi, Kiran Reddy Huang, Pei-Yu Chang, Ya-Lin Wu, Cheng Hsin Li, Wei Kankala, Ranjith Kumar Tai, Dar-Fu Lee, Chia-Hung Nanomaterials (Basel) Article In this study, a methodology utilizing peptide conformational imprints (PCIs) as a tool to specifically immobilize porcine pancreatic alpha-trypsin (PPT) at a targeted position is demonstrated. Owing to the fabrication of segment-mediated PCIs on the magnetic particles (PCIMPs), elegant cavities complementary to the PPT structure are constructed. Based on the sequence on targeted PPT, the individual region of the enzyme is trapped with different template-derived PCIMPs to show certain types of inhibition. Upon hydrolysis, N-benzoyl-L-arginine ethyl ester (BAEE) is employed to assess the hydrolytic activity of PCIMPs bound to the trypsin using high-performance liquid chromatography (HPLC) analysis. Further, the kinetic data of four different PCIMPs are compared. As a result, the PCIMPs presented non-competitive inhibition toward trypsin, according to the Lineweaver-Burk plot. Further, the kinetic analysis confirmed that the best parameters of PPT/PCIMPs (233–245+G) were V(max) = 1.47 × 10(−3) mM s(−1), K(m) = 0.42 mM, k(cat) = 1.16 s(−1), and k(cat)/K(m) = 2.79 mM(−1) s(−1). As PPT is bound tightly to the correct position, its catalytic activities could be sustained. Additionally, our findings stated that the immobilized PPT could maintain stable activity even after four successive cycles. MDPI 2021-01-27 /pmc/articles/PMC7911952/ /pubmed/33513990 http://dx.doi.org/10.3390/nano11020334 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Kanubaddi, Kiran Reddy
Huang, Pei-Yu
Chang, Ya-Lin
Wu, Cheng Hsin
Li, Wei
Kankala, Ranjith Kumar
Tai, Dar-Fu
Lee, Chia-Hung
Deviation of Trypsin Activity Using Peptide Conformational Imprints
title Deviation of Trypsin Activity Using Peptide Conformational Imprints
title_full Deviation of Trypsin Activity Using Peptide Conformational Imprints
title_fullStr Deviation of Trypsin Activity Using Peptide Conformational Imprints
title_full_unstemmed Deviation of Trypsin Activity Using Peptide Conformational Imprints
title_short Deviation of Trypsin Activity Using Peptide Conformational Imprints
title_sort deviation of trypsin activity using peptide conformational imprints
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7911952/
https://www.ncbi.nlm.nih.gov/pubmed/33513990
http://dx.doi.org/10.3390/nano11020334
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