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Bayesian Network as a Decision Tool for Predicting ALS Disease
Clinical diagnosis of amyotrophic lateral sclerosis (ALS) is difficult in the early period. But blood tests are less time consuming and low cost methods compared to other methods for the diagnosis. The ALS researchers have been used machine learning methods to predict the genetic architecture of dis...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7912628/ https://www.ncbi.nlm.nih.gov/pubmed/33498784 http://dx.doi.org/10.3390/brainsci11020150 |
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author | Karaboga, Hasan Aykut Gunel, Aslihan Korkut, Senay Vural Demir, Ibrahim Celik, Resit |
author_facet | Karaboga, Hasan Aykut Gunel, Aslihan Korkut, Senay Vural Demir, Ibrahim Celik, Resit |
author_sort | Karaboga, Hasan Aykut |
collection | PubMed |
description | Clinical diagnosis of amyotrophic lateral sclerosis (ALS) is difficult in the early period. But blood tests are less time consuming and low cost methods compared to other methods for the diagnosis. The ALS researchers have been used machine learning methods to predict the genetic architecture of disease. In this study we take advantages of Bayesian networks and machine learning methods to predict the ALS patients with blood plasma protein level and independent personal features. According to the comparison results, Bayesian Networks produced best results with accuracy (0.887), area under the curve (AUC) (0.970) and other comparison metrics. We confirmed that sex and age are effective variables on the ALS. In addition, we found that the probability of onset involvement in the ALS patients is very high. Also, a person’s other chronic or neurological diseases are associated with the ALS disease. Finally, we confirmed that the Parkin level may also have an effect on the ALS disease. While this protein is at very low levels in Parkinson’s patients, it is higher in the ALS patients than all control groups. |
format | Online Article Text |
id | pubmed-7912628 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-79126282021-02-28 Bayesian Network as a Decision Tool for Predicting ALS Disease Karaboga, Hasan Aykut Gunel, Aslihan Korkut, Senay Vural Demir, Ibrahim Celik, Resit Brain Sci Article Clinical diagnosis of amyotrophic lateral sclerosis (ALS) is difficult in the early period. But blood tests are less time consuming and low cost methods compared to other methods for the diagnosis. The ALS researchers have been used machine learning methods to predict the genetic architecture of disease. In this study we take advantages of Bayesian networks and machine learning methods to predict the ALS patients with blood plasma protein level and independent personal features. According to the comparison results, Bayesian Networks produced best results with accuracy (0.887), area under the curve (AUC) (0.970) and other comparison metrics. We confirmed that sex and age are effective variables on the ALS. In addition, we found that the probability of onset involvement in the ALS patients is very high. Also, a person’s other chronic or neurological diseases are associated with the ALS disease. Finally, we confirmed that the Parkin level may also have an effect on the ALS disease. While this protein is at very low levels in Parkinson’s patients, it is higher in the ALS patients than all control groups. MDPI 2021-01-23 /pmc/articles/PMC7912628/ /pubmed/33498784 http://dx.doi.org/10.3390/brainsci11020150 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Karaboga, Hasan Aykut Gunel, Aslihan Korkut, Senay Vural Demir, Ibrahim Celik, Resit Bayesian Network as a Decision Tool for Predicting ALS Disease |
title | Bayesian Network as a Decision Tool for Predicting ALS Disease |
title_full | Bayesian Network as a Decision Tool for Predicting ALS Disease |
title_fullStr | Bayesian Network as a Decision Tool for Predicting ALS Disease |
title_full_unstemmed | Bayesian Network as a Decision Tool for Predicting ALS Disease |
title_short | Bayesian Network as a Decision Tool for Predicting ALS Disease |
title_sort | bayesian network as a decision tool for predicting als disease |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7912628/ https://www.ncbi.nlm.nih.gov/pubmed/33498784 http://dx.doi.org/10.3390/brainsci11020150 |
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