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Bayesian Network as a Decision Tool for Predicting ALS Disease

Clinical diagnosis of amyotrophic lateral sclerosis (ALS) is difficult in the early period. But blood tests are less time consuming and low cost methods compared to other methods for the diagnosis. The ALS researchers have been used machine learning methods to predict the genetic architecture of dis...

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Autores principales: Karaboga, Hasan Aykut, Gunel, Aslihan, Korkut, Senay Vural, Demir, Ibrahim, Celik, Resit
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7912628/
https://www.ncbi.nlm.nih.gov/pubmed/33498784
http://dx.doi.org/10.3390/brainsci11020150
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author Karaboga, Hasan Aykut
Gunel, Aslihan
Korkut, Senay Vural
Demir, Ibrahim
Celik, Resit
author_facet Karaboga, Hasan Aykut
Gunel, Aslihan
Korkut, Senay Vural
Demir, Ibrahim
Celik, Resit
author_sort Karaboga, Hasan Aykut
collection PubMed
description Clinical diagnosis of amyotrophic lateral sclerosis (ALS) is difficult in the early period. But blood tests are less time consuming and low cost methods compared to other methods for the diagnosis. The ALS researchers have been used machine learning methods to predict the genetic architecture of disease. In this study we take advantages of Bayesian networks and machine learning methods to predict the ALS patients with blood plasma protein level and independent personal features. According to the comparison results, Bayesian Networks produced best results with accuracy (0.887), area under the curve (AUC) (0.970) and other comparison metrics. We confirmed that sex and age are effective variables on the ALS. In addition, we found that the probability of onset involvement in the ALS patients is very high. Also, a person’s other chronic or neurological diseases are associated with the ALS disease. Finally, we confirmed that the Parkin level may also have an effect on the ALS disease. While this protein is at very low levels in Parkinson’s patients, it is higher in the ALS patients than all control groups.
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spelling pubmed-79126282021-02-28 Bayesian Network as a Decision Tool for Predicting ALS Disease Karaboga, Hasan Aykut Gunel, Aslihan Korkut, Senay Vural Demir, Ibrahim Celik, Resit Brain Sci Article Clinical diagnosis of amyotrophic lateral sclerosis (ALS) is difficult in the early period. But blood tests are less time consuming and low cost methods compared to other methods for the diagnosis. The ALS researchers have been used machine learning methods to predict the genetic architecture of disease. In this study we take advantages of Bayesian networks and machine learning methods to predict the ALS patients with blood plasma protein level and independent personal features. According to the comparison results, Bayesian Networks produced best results with accuracy (0.887), area under the curve (AUC) (0.970) and other comparison metrics. We confirmed that sex and age are effective variables on the ALS. In addition, we found that the probability of onset involvement in the ALS patients is very high. Also, a person’s other chronic or neurological diseases are associated with the ALS disease. Finally, we confirmed that the Parkin level may also have an effect on the ALS disease. While this protein is at very low levels in Parkinson’s patients, it is higher in the ALS patients than all control groups. MDPI 2021-01-23 /pmc/articles/PMC7912628/ /pubmed/33498784 http://dx.doi.org/10.3390/brainsci11020150 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Karaboga, Hasan Aykut
Gunel, Aslihan
Korkut, Senay Vural
Demir, Ibrahim
Celik, Resit
Bayesian Network as a Decision Tool for Predicting ALS Disease
title Bayesian Network as a Decision Tool for Predicting ALS Disease
title_full Bayesian Network as a Decision Tool for Predicting ALS Disease
title_fullStr Bayesian Network as a Decision Tool for Predicting ALS Disease
title_full_unstemmed Bayesian Network as a Decision Tool for Predicting ALS Disease
title_short Bayesian Network as a Decision Tool for Predicting ALS Disease
title_sort bayesian network as a decision tool for predicting als disease
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7912628/
https://www.ncbi.nlm.nih.gov/pubmed/33498784
http://dx.doi.org/10.3390/brainsci11020150
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