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Design of PG-Surfactants Bearing Polyacrylamide Polymer Chain to Solubilize Membrane Proteins in a Surfactant-Free Buffer

The development of techniques capable of using membrane proteins in a surfactant-free aqueous buffer is an attractive research area, and it should be elucidated for various membrane protein studies. To this end, we examined a method using new solubilization surfactants that do not detach from membra...

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Autores principales: Shimamoto, Taro, Nakakubo, Tatsuki, Noji, Tomoyasu, Koeda, Shuhei, Kawakami, Keisuke, Kamiya, Nobuo, Mizuno, Toshihisa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7913505/
https://www.ncbi.nlm.nih.gov/pubmed/33546366
http://dx.doi.org/10.3390/ijms22041524
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author Shimamoto, Taro
Nakakubo, Tatsuki
Noji, Tomoyasu
Koeda, Shuhei
Kawakami, Keisuke
Kamiya, Nobuo
Mizuno, Toshihisa
author_facet Shimamoto, Taro
Nakakubo, Tatsuki
Noji, Tomoyasu
Koeda, Shuhei
Kawakami, Keisuke
Kamiya, Nobuo
Mizuno, Toshihisa
author_sort Shimamoto, Taro
collection PubMed
description The development of techniques capable of using membrane proteins in a surfactant-free aqueous buffer is an attractive research area, and it should be elucidated for various membrane protein studies. To this end, we examined a method using new solubilization surfactants that do not detach from membrane protein surfaces once bound. The designed solubilization surfactants, DKDKC(12)K-PA(n) (n = 5, 7, and 18), consist of two parts: one is the lipopeptide-based solubilization surfactant part, DKDKC(12)K, fand the other is the covalently connected linear polyacrylamide (PA) chain with different M(w) values of 5, 7, or 18 kDa. Intermolecular interactions between the PA chains in DKDKC(12)K-PA(n) concentrated on the surfaces of membrane proteins via amphiphilic binding of the DKDKC(12)K part to the integral membrane domain was observed. Therefore, DKDKC(12)K-PA(n) (n = 5, 7, and 18) could maintain a bound state even after removal of the unbound by ultrafiltration or gel-filtration chromatography. We used photosystem I (PSI) from Thermosynecoccus vulcanus as a representative to assess the impacts of new surfactants on the solubilized membrane protein structure and functions. Based on the maintenance of unique photophysical properties of PSI, we evaluated the ability of DKDKC(12)K-PA(n) (n = 5, 7, and 18) as a new solubilization surfactant.
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spelling pubmed-79135052021-02-28 Design of PG-Surfactants Bearing Polyacrylamide Polymer Chain to Solubilize Membrane Proteins in a Surfactant-Free Buffer Shimamoto, Taro Nakakubo, Tatsuki Noji, Tomoyasu Koeda, Shuhei Kawakami, Keisuke Kamiya, Nobuo Mizuno, Toshihisa Int J Mol Sci Article The development of techniques capable of using membrane proteins in a surfactant-free aqueous buffer is an attractive research area, and it should be elucidated for various membrane protein studies. To this end, we examined a method using new solubilization surfactants that do not detach from membrane protein surfaces once bound. The designed solubilization surfactants, DKDKC(12)K-PA(n) (n = 5, 7, and 18), consist of two parts: one is the lipopeptide-based solubilization surfactant part, DKDKC(12)K, fand the other is the covalently connected linear polyacrylamide (PA) chain with different M(w) values of 5, 7, or 18 kDa. Intermolecular interactions between the PA chains in DKDKC(12)K-PA(n) concentrated on the surfaces of membrane proteins via amphiphilic binding of the DKDKC(12)K part to the integral membrane domain was observed. Therefore, DKDKC(12)K-PA(n) (n = 5, 7, and 18) could maintain a bound state even after removal of the unbound by ultrafiltration or gel-filtration chromatography. We used photosystem I (PSI) from Thermosynecoccus vulcanus as a representative to assess the impacts of new surfactants on the solubilized membrane protein structure and functions. Based on the maintenance of unique photophysical properties of PSI, we evaluated the ability of DKDKC(12)K-PA(n) (n = 5, 7, and 18) as a new solubilization surfactant. MDPI 2021-02-03 /pmc/articles/PMC7913505/ /pubmed/33546366 http://dx.doi.org/10.3390/ijms22041524 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Shimamoto, Taro
Nakakubo, Tatsuki
Noji, Tomoyasu
Koeda, Shuhei
Kawakami, Keisuke
Kamiya, Nobuo
Mizuno, Toshihisa
Design of PG-Surfactants Bearing Polyacrylamide Polymer Chain to Solubilize Membrane Proteins in a Surfactant-Free Buffer
title Design of PG-Surfactants Bearing Polyacrylamide Polymer Chain to Solubilize Membrane Proteins in a Surfactant-Free Buffer
title_full Design of PG-Surfactants Bearing Polyacrylamide Polymer Chain to Solubilize Membrane Proteins in a Surfactant-Free Buffer
title_fullStr Design of PG-Surfactants Bearing Polyacrylamide Polymer Chain to Solubilize Membrane Proteins in a Surfactant-Free Buffer
title_full_unstemmed Design of PG-Surfactants Bearing Polyacrylamide Polymer Chain to Solubilize Membrane Proteins in a Surfactant-Free Buffer
title_short Design of PG-Surfactants Bearing Polyacrylamide Polymer Chain to Solubilize Membrane Proteins in a Surfactant-Free Buffer
title_sort design of pg-surfactants bearing polyacrylamide polymer chain to solubilize membrane proteins in a surfactant-free buffer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7913505/
https://www.ncbi.nlm.nih.gov/pubmed/33546366
http://dx.doi.org/10.3390/ijms22041524
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