Cargando…

Understanding Demographic Risk Factors for Adverse Outcomes in COVID-19 Patients: Explanation of a Deep Learning Model

This study was to understand the impacts of three key demographic variables, age, gender, and race, on the adverse outcome of all-cause hospitalization or all-cause mortality in patients with COVID-19, using a deep neural network (DNN) analysis. We created a cohort of Veterans who were tested positi...

Descripción completa

Detalles Bibliográficos
Autores principales: Shao, Yijun, Ahmed, Ali, Liappis, Angelike P., Faselis, Charles, Nelson, Stuart J., Zeng-Treitler, Qing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7914049/
https://www.ncbi.nlm.nih.gov/pubmed/33681695
http://dx.doi.org/10.1007/s41666-021-00093-9
_version_ 1783656944891854848
author Shao, Yijun
Ahmed, Ali
Liappis, Angelike P.
Faselis, Charles
Nelson, Stuart J.
Zeng-Treitler, Qing
author_facet Shao, Yijun
Ahmed, Ali
Liappis, Angelike P.
Faselis, Charles
Nelson, Stuart J.
Zeng-Treitler, Qing
author_sort Shao, Yijun
collection PubMed
description This study was to understand the impacts of three key demographic variables, age, gender, and race, on the adverse outcome of all-cause hospitalization or all-cause mortality in patients with COVID-19, using a deep neural network (DNN) analysis. We created a cohort of Veterans who were tested positive for COVID-19, extracted data on age, gender, and race, and clinical characteristics from their electronic health records, and trained a DNN model for predicting the adverse outcome. Then, we analyzed the association of the demographic variables with the risks of the adverse outcome using the impact scores and interaction scores for explaining DNN models. The results showed that, on average, older age and African American race were associated with higher risks while female gender was associated with lower risks. However, individual-level impact scores of age showed that age was a more impactful risk factor in younger patients and in older patients with fewer comorbidities. The individual-level impact scores of gender and race variables had a wide span covering both positive and negative values. The interaction scores between the demographic variables showed that the interaction effects were minimal compared to the impact scores associated with them. In conclusion, the DNN model is able to capture the non-linear relationship between the risk factors and the adverse outcome, and the impact scores and interaction scores can help explain the complicated non-linear effects between the demographic variables and the risk of the outcome.
format Online
Article
Text
id pubmed-7914049
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Springer International Publishing
record_format MEDLINE/PubMed
spelling pubmed-79140492021-03-01 Understanding Demographic Risk Factors for Adverse Outcomes in COVID-19 Patients: Explanation of a Deep Learning Model Shao, Yijun Ahmed, Ali Liappis, Angelike P. Faselis, Charles Nelson, Stuart J. Zeng-Treitler, Qing J Healthc Inform Res Research Article This study was to understand the impacts of three key demographic variables, age, gender, and race, on the adverse outcome of all-cause hospitalization or all-cause mortality in patients with COVID-19, using a deep neural network (DNN) analysis. We created a cohort of Veterans who were tested positive for COVID-19, extracted data on age, gender, and race, and clinical characteristics from their electronic health records, and trained a DNN model for predicting the adverse outcome. Then, we analyzed the association of the demographic variables with the risks of the adverse outcome using the impact scores and interaction scores for explaining DNN models. The results showed that, on average, older age and African American race were associated with higher risks while female gender was associated with lower risks. However, individual-level impact scores of age showed that age was a more impactful risk factor in younger patients and in older patients with fewer comorbidities. The individual-level impact scores of gender and race variables had a wide span covering both positive and negative values. The interaction scores between the demographic variables showed that the interaction effects were minimal compared to the impact scores associated with them. In conclusion, the DNN model is able to capture the non-linear relationship between the risk factors and the adverse outcome, and the impact scores and interaction scores can help explain the complicated non-linear effects between the demographic variables and the risk of the outcome. Springer International Publishing 2021-02-27 /pmc/articles/PMC7914049/ /pubmed/33681695 http://dx.doi.org/10.1007/s41666-021-00093-9 Text en © This is a U.S. government work and not under copyright protection in the U.S.; foreign copyright protection may apply 2021
spellingShingle Research Article
Shao, Yijun
Ahmed, Ali
Liappis, Angelike P.
Faselis, Charles
Nelson, Stuart J.
Zeng-Treitler, Qing
Understanding Demographic Risk Factors for Adverse Outcomes in COVID-19 Patients: Explanation of a Deep Learning Model
title Understanding Demographic Risk Factors for Adverse Outcomes in COVID-19 Patients: Explanation of a Deep Learning Model
title_full Understanding Demographic Risk Factors for Adverse Outcomes in COVID-19 Patients: Explanation of a Deep Learning Model
title_fullStr Understanding Demographic Risk Factors for Adverse Outcomes in COVID-19 Patients: Explanation of a Deep Learning Model
title_full_unstemmed Understanding Demographic Risk Factors for Adverse Outcomes in COVID-19 Patients: Explanation of a Deep Learning Model
title_short Understanding Demographic Risk Factors for Adverse Outcomes in COVID-19 Patients: Explanation of a Deep Learning Model
title_sort understanding demographic risk factors for adverse outcomes in covid-19 patients: explanation of a deep learning model
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7914049/
https://www.ncbi.nlm.nih.gov/pubmed/33681695
http://dx.doi.org/10.1007/s41666-021-00093-9
work_keys_str_mv AT shaoyijun understandingdemographicriskfactorsforadverseoutcomesincovid19patientsexplanationofadeeplearningmodel
AT ahmedali understandingdemographicriskfactorsforadverseoutcomesincovid19patientsexplanationofadeeplearningmodel
AT liappisangelikep understandingdemographicriskfactorsforadverseoutcomesincovid19patientsexplanationofadeeplearningmodel
AT faselischarles understandingdemographicriskfactorsforadverseoutcomesincovid19patientsexplanationofadeeplearningmodel
AT nelsonstuartj understandingdemographicriskfactorsforadverseoutcomesincovid19patientsexplanationofadeeplearningmodel
AT zengtreitlerqing understandingdemographicriskfactorsforadverseoutcomesincovid19patientsexplanationofadeeplearningmodel