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An integrated autoencoder-based hybrid CNN-LSTM model for COVID-19 severity prediction from lung ultrasound()

The COVID-19 pandemic has become one of the biggest threats to the global healthcare system, creating an unprecedented condition worldwide. The necessity of rapid diagnosis calls for alternative methods to predict the condition of the patient, for which disease severity estimation on the basis of Lu...

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Autores principales: Dastider, Ankan Ghosh, Sadik, Farhan, Fattah, Shaikh Anowarul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Published by Elsevier Ltd. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7914375/
https://www.ncbi.nlm.nih.gov/pubmed/33684688
http://dx.doi.org/10.1016/j.compbiomed.2021.104296
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author Dastider, Ankan Ghosh
Sadik, Farhan
Fattah, Shaikh Anowarul
author_facet Dastider, Ankan Ghosh
Sadik, Farhan
Fattah, Shaikh Anowarul
author_sort Dastider, Ankan Ghosh
collection PubMed
description The COVID-19 pandemic has become one of the biggest threats to the global healthcare system, creating an unprecedented condition worldwide. The necessity of rapid diagnosis calls for alternative methods to predict the condition of the patient, for which disease severity estimation on the basis of Lung Ultrasound (LUS) can be a safe, radiation-free, flexible, and favorable option. In this paper, a frame-based 4-score disease severity prediction architecture is proposed with the integration of deep convolutional and recurrent neural networks to consider both spatial and temporal features of the LUS frames. The proposed convolutional neural network (CNN) architecture implements an autoencoder network and separable convolutional branches fused with a modified DenseNet-201 network to build a vigorous, noise-free classification model. A five-fold cross-validation scheme is performed to affirm the efficacy of the proposed network. In-depth result analysis shows a promising improvement in the classification performance by introducing the Long Short-Term Memory (LSTM) layers after the proposed CNN architecture by an average of [Formula: see text] , which is approximately [Formula: see text] more than the traditional DenseNet architecture alone. From an extensive analysis, it is found that the proposed end-to-end scheme is very effective in detecting COVID-19 severity scores from LUS images.
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spelling pubmed-79143752021-03-01 An integrated autoencoder-based hybrid CNN-LSTM model for COVID-19 severity prediction from lung ultrasound() Dastider, Ankan Ghosh Sadik, Farhan Fattah, Shaikh Anowarul Comput Biol Med Article The COVID-19 pandemic has become one of the biggest threats to the global healthcare system, creating an unprecedented condition worldwide. The necessity of rapid diagnosis calls for alternative methods to predict the condition of the patient, for which disease severity estimation on the basis of Lung Ultrasound (LUS) can be a safe, radiation-free, flexible, and favorable option. In this paper, a frame-based 4-score disease severity prediction architecture is proposed with the integration of deep convolutional and recurrent neural networks to consider both spatial and temporal features of the LUS frames. The proposed convolutional neural network (CNN) architecture implements an autoencoder network and separable convolutional branches fused with a modified DenseNet-201 network to build a vigorous, noise-free classification model. A five-fold cross-validation scheme is performed to affirm the efficacy of the proposed network. In-depth result analysis shows a promising improvement in the classification performance by introducing the Long Short-Term Memory (LSTM) layers after the proposed CNN architecture by an average of [Formula: see text] , which is approximately [Formula: see text] more than the traditional DenseNet architecture alone. From an extensive analysis, it is found that the proposed end-to-end scheme is very effective in detecting COVID-19 severity scores from LUS images. Published by Elsevier Ltd. 2021-05 2021-02-28 /pmc/articles/PMC7914375/ /pubmed/33684688 http://dx.doi.org/10.1016/j.compbiomed.2021.104296 Text en © 2021 Published by Elsevier Ltd. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Dastider, Ankan Ghosh
Sadik, Farhan
Fattah, Shaikh Anowarul
An integrated autoencoder-based hybrid CNN-LSTM model for COVID-19 severity prediction from lung ultrasound()
title An integrated autoencoder-based hybrid CNN-LSTM model for COVID-19 severity prediction from lung ultrasound()
title_full An integrated autoencoder-based hybrid CNN-LSTM model for COVID-19 severity prediction from lung ultrasound()
title_fullStr An integrated autoencoder-based hybrid CNN-LSTM model for COVID-19 severity prediction from lung ultrasound()
title_full_unstemmed An integrated autoencoder-based hybrid CNN-LSTM model for COVID-19 severity prediction from lung ultrasound()
title_short An integrated autoencoder-based hybrid CNN-LSTM model for COVID-19 severity prediction from lung ultrasound()
title_sort integrated autoencoder-based hybrid cnn-lstm model for covid-19 severity prediction from lung ultrasound()
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7914375/
https://www.ncbi.nlm.nih.gov/pubmed/33684688
http://dx.doi.org/10.1016/j.compbiomed.2021.104296
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