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Point-of-Care System for HTLV-1 Proviral Load Quantification by Digital Mediator Displacement LAMP

This paper presents a universal point-of-care system for fully automated quantification of human T-cell lymphotropic virus type 1 (HTLV-1) proviral load, including genomic RNA, based on digital reverse RNA transcription and c-DNA amplification by MD LAMP (mediator displacement loop-mediated isotherm...

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Detalles Bibliográficos
Autores principales: Becherer, Lisa, Hess, Jacob Friedrich, Frischmann, Sieghard, Bakheit, Mohammed, Nitschko, Hans, Stinco, Silvina, Zitz, Friedrich, Hofer, Hannes, Porro, Giampiero, Hausladen, Florian, Stock, Karl, Drossart, Dominik, Wurm, Holger, Kuhn, Hanna, Huber, Dominik, Hutzenlaub, Tobias, Paust, Nils, Keller, Mark, Strohmeier, Oliver, Wadle, Simon, Borst, Nadine, Zengerle, Roland, von Stetten, Felix
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7915047/
https://www.ncbi.nlm.nih.gov/pubmed/33562822
http://dx.doi.org/10.3390/mi12020159
Descripción
Sumario:This paper presents a universal point-of-care system for fully automated quantification of human T-cell lymphotropic virus type 1 (HTLV-1) proviral load, including genomic RNA, based on digital reverse RNA transcription and c-DNA amplification by MD LAMP (mediator displacement loop-mediated isothermal amplification). A disposable microfluidic LabDisk with pre-stored reagents performs automated nucleic acid extraction, reaction setup, emulsification, reverse transcription, digital DNA amplification, and quantitative fluorogenic endpoint detection with universal reporter molecules. Automated nucleic acid extraction from a suspension of HTLV-1-infected CD4+ T-lymphocytes (MT-2 cells) yielded 8 ± 7 viral nucleic acid copies per MT-2 cell, very similar to the manual reference extraction (7 ± 2 nucleic acid copies). Fully automated sample processing from whole blood spiked with MT-2 cells showed a comparable result of 7 ± 3 copies per MT-2 cell after a run time of two hours and 10 min.