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Colorimetric LPMO assay with direct implication for cellulolytic activity

BACKGROUND: Lytic polysaccharide monooxygenases (LPMOs) are important industrial enzymes known for their catalytic degradation of recalcitrant polymers such as cellulose or chitin. Their activity can be measured by lengthy HPLC methods, while high-throughput methods are less specific. A fast and spe...

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Autores principales: Brander, Søren, Lausten, Stine, Ipsen, Johan Ø., Falkenberg, Kristoffer B., Bertelsen, Andreas B., Nørholm, Morten H. H., Østergaard, Lars H., Johansen, Katja S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7916272/
https://www.ncbi.nlm.nih.gov/pubmed/33640002
http://dx.doi.org/10.1186/s13068-021-01902-4
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author Brander, Søren
Lausten, Stine
Ipsen, Johan Ø.
Falkenberg, Kristoffer B.
Bertelsen, Andreas B.
Nørholm, Morten H. H.
Østergaard, Lars H.
Johansen, Katja S.
author_facet Brander, Søren
Lausten, Stine
Ipsen, Johan Ø.
Falkenberg, Kristoffer B.
Bertelsen, Andreas B.
Nørholm, Morten H. H.
Østergaard, Lars H.
Johansen, Katja S.
author_sort Brander, Søren
collection PubMed
description BACKGROUND: Lytic polysaccharide monooxygenases (LPMOs) are important industrial enzymes known for their catalytic degradation of recalcitrant polymers such as cellulose or chitin. Their activity can be measured by lengthy HPLC methods, while high-throughput methods are less specific. A fast and specific LPMO assay would simplify screening for new or engineered LPMOs and accelerate biochemical characterization. RESULTS: A novel LPMO activity assay was developed based on the production of the dye phenolphthalein (PHP) from its reduced counterpart (rPHP). The colour response of rPHP oxidisation catalysed by the cellulose-specific LPMO from Thermoascus aurantiacus (TaAA9A), was found to increase tenfold by adding dehydroascorbate (DHA) as a co-substrate. The assay using a combination of rPHP and DHA was tested on 12 different metallo-enzymes, but only the LPMOs catalysed this reaction. The assay was optimized for characterization of TaAA9A and showed a sensitivity of 15 nM after 30 min incubation. It followed apparent Michaelis–Menten kinetics with k(cat) = 0.09 s(−1) and K(M) = 244 µM, and the assay was used to confirm stoichiometric copper–enzyme binding and enzyme unfolding at a temperature of approximately 60 °C. DHA, glutathione and fructose were found to enhance LPMO oxidation of rPHP and in the optimized assay conditions these co-substrates also enabled cellulose degradation. CONCLUSIONS: This novel and specific LPMO assay can be carried out in a convenient microtiter plate format ready for high-throughput screening and enzyme characterization. DHA was the best co-substrate tested for oxidation of rPHP and this preference appears to be LPMO-specific. The identified co-substrates DHA and fructose are not normally considered as LPMO co-substrates but here they are shown to facilitate both oxidation of rPHP and degradation of cellulose. This is a rare example of a finding from a high-throughput assay that directly translate into enzyme activity on an insoluble substrate. The rPHP-based assay thus expands our understanding of LPMO catalysed reactions and has the potential to characterize LPMO activity in industrial settings, where usual co-substrates such as ascorbate and oxygen are depleted. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13068-021-01902-4.
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spelling pubmed-79162722021-03-02 Colorimetric LPMO assay with direct implication for cellulolytic activity Brander, Søren Lausten, Stine Ipsen, Johan Ø. Falkenberg, Kristoffer B. Bertelsen, Andreas B. Nørholm, Morten H. H. Østergaard, Lars H. Johansen, Katja S. Biotechnol Biofuels Methodology BACKGROUND: Lytic polysaccharide monooxygenases (LPMOs) are important industrial enzymes known for their catalytic degradation of recalcitrant polymers such as cellulose or chitin. Their activity can be measured by lengthy HPLC methods, while high-throughput methods are less specific. A fast and specific LPMO assay would simplify screening for new or engineered LPMOs and accelerate biochemical characterization. RESULTS: A novel LPMO activity assay was developed based on the production of the dye phenolphthalein (PHP) from its reduced counterpart (rPHP). The colour response of rPHP oxidisation catalysed by the cellulose-specific LPMO from Thermoascus aurantiacus (TaAA9A), was found to increase tenfold by adding dehydroascorbate (DHA) as a co-substrate. The assay using a combination of rPHP and DHA was tested on 12 different metallo-enzymes, but only the LPMOs catalysed this reaction. The assay was optimized for characterization of TaAA9A and showed a sensitivity of 15 nM after 30 min incubation. It followed apparent Michaelis–Menten kinetics with k(cat) = 0.09 s(−1) and K(M) = 244 µM, and the assay was used to confirm stoichiometric copper–enzyme binding and enzyme unfolding at a temperature of approximately 60 °C. DHA, glutathione and fructose were found to enhance LPMO oxidation of rPHP and in the optimized assay conditions these co-substrates also enabled cellulose degradation. CONCLUSIONS: This novel and specific LPMO assay can be carried out in a convenient microtiter plate format ready for high-throughput screening and enzyme characterization. DHA was the best co-substrate tested for oxidation of rPHP and this preference appears to be LPMO-specific. The identified co-substrates DHA and fructose are not normally considered as LPMO co-substrates but here they are shown to facilitate both oxidation of rPHP and degradation of cellulose. This is a rare example of a finding from a high-throughput assay that directly translate into enzyme activity on an insoluble substrate. The rPHP-based assay thus expands our understanding of LPMO catalysed reactions and has the potential to characterize LPMO activity in industrial settings, where usual co-substrates such as ascorbate and oxygen are depleted. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13068-021-01902-4. BioMed Central 2021-02-27 /pmc/articles/PMC7916272/ /pubmed/33640002 http://dx.doi.org/10.1186/s13068-021-01902-4 Text en © The Author(s) 2021, corrected publication 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Methodology
Brander, Søren
Lausten, Stine
Ipsen, Johan Ø.
Falkenberg, Kristoffer B.
Bertelsen, Andreas B.
Nørholm, Morten H. H.
Østergaard, Lars H.
Johansen, Katja S.
Colorimetric LPMO assay with direct implication for cellulolytic activity
title Colorimetric LPMO assay with direct implication for cellulolytic activity
title_full Colorimetric LPMO assay with direct implication for cellulolytic activity
title_fullStr Colorimetric LPMO assay with direct implication for cellulolytic activity
title_full_unstemmed Colorimetric LPMO assay with direct implication for cellulolytic activity
title_short Colorimetric LPMO assay with direct implication for cellulolytic activity
title_sort colorimetric lpmo assay with direct implication for cellulolytic activity
topic Methodology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7916272/
https://www.ncbi.nlm.nih.gov/pubmed/33640002
http://dx.doi.org/10.1186/s13068-021-01902-4
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