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Heteroalleles in Common Wheat: Multiple Differences between Allelic Variants of the Gli-B1 Locus

The Gli-B1-encoded γ-gliadins and non-coding γ-gliadin DNA sequences for 15 different alleles of common wheat have been compared using seven tests: electrophoretic mobility (EM) and molecular weight (MW) of the encoded major γ-gliadin, restriction fragment length polymorphism patterns (RFLPs) (three...

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Autores principales: Metakovsky, Eugene, Pascual, Laura, Vaccino, Patrizia, Melnik, Viktor, Rodriguez-Quijano, Marta, Popovych, Yulia, Chebotar, Sabina, Rogers, William John
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7917834/
https://www.ncbi.nlm.nih.gov/pubmed/33673225
http://dx.doi.org/10.3390/ijms22041832
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author Metakovsky, Eugene
Pascual, Laura
Vaccino, Patrizia
Melnik, Viktor
Rodriguez-Quijano, Marta
Popovych, Yulia
Chebotar, Sabina
Rogers, William John
author_facet Metakovsky, Eugene
Pascual, Laura
Vaccino, Patrizia
Melnik, Viktor
Rodriguez-Quijano, Marta
Popovych, Yulia
Chebotar, Sabina
Rogers, William John
author_sort Metakovsky, Eugene
collection PubMed
description The Gli-B1-encoded γ-gliadins and non-coding γ-gliadin DNA sequences for 15 different alleles of common wheat have been compared using seven tests: electrophoretic mobility (EM) and molecular weight (MW) of the encoded major γ-gliadin, restriction fragment length polymorphism patterns (RFLPs) (three different markers), Gli-B1-γ-gliadin-pseudogene known SNP markers (Single nucleotide polymorphisms) and sequencing the pseudogene GAG56B. It was discovered that encoded γ-gliadins, with contrasting EM, had similar MWs. However, seven allelic variants (designated from I to VII) differed among them in the other six tests: I (alleles Gli-B1i, k, m, o), II (Gli-B1n, q, s), III (Gli-B1b), IV (Gli-B1e, f, g), V (Gli-B1h), VI (Gli-B1d) and VII (Gli-B1a). Allele Gli-B1c (variant VIII) was identical to the alleles from group IV in four of the tests. Some tests might show a fine difference between alleles belonging to the same variant. Our results attest in favor of the independent origin of at least seven variants at the Gli-B1 locus that might originate from deeply diverged genotypes of the donor(s) of the B genome in hexaploid wheat and therefore might be called “heteroallelic”. The donor’s particularities at the Gli-B1 locus might be conserved since that time and decisively contribute to the current high genetic diversity of common wheat.
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spelling pubmed-79178342021-03-02 Heteroalleles in Common Wheat: Multiple Differences between Allelic Variants of the Gli-B1 Locus Metakovsky, Eugene Pascual, Laura Vaccino, Patrizia Melnik, Viktor Rodriguez-Quijano, Marta Popovych, Yulia Chebotar, Sabina Rogers, William John Int J Mol Sci Article The Gli-B1-encoded γ-gliadins and non-coding γ-gliadin DNA sequences for 15 different alleles of common wheat have been compared using seven tests: electrophoretic mobility (EM) and molecular weight (MW) of the encoded major γ-gliadin, restriction fragment length polymorphism patterns (RFLPs) (three different markers), Gli-B1-γ-gliadin-pseudogene known SNP markers (Single nucleotide polymorphisms) and sequencing the pseudogene GAG56B. It was discovered that encoded γ-gliadins, with contrasting EM, had similar MWs. However, seven allelic variants (designated from I to VII) differed among them in the other six tests: I (alleles Gli-B1i, k, m, o), II (Gli-B1n, q, s), III (Gli-B1b), IV (Gli-B1e, f, g), V (Gli-B1h), VI (Gli-B1d) and VII (Gli-B1a). Allele Gli-B1c (variant VIII) was identical to the alleles from group IV in four of the tests. Some tests might show a fine difference between alleles belonging to the same variant. Our results attest in favor of the independent origin of at least seven variants at the Gli-B1 locus that might originate from deeply diverged genotypes of the donor(s) of the B genome in hexaploid wheat and therefore might be called “heteroallelic”. The donor’s particularities at the Gli-B1 locus might be conserved since that time and decisively contribute to the current high genetic diversity of common wheat. MDPI 2021-02-12 /pmc/articles/PMC7917834/ /pubmed/33673225 http://dx.doi.org/10.3390/ijms22041832 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Metakovsky, Eugene
Pascual, Laura
Vaccino, Patrizia
Melnik, Viktor
Rodriguez-Quijano, Marta
Popovych, Yulia
Chebotar, Sabina
Rogers, William John
Heteroalleles in Common Wheat: Multiple Differences between Allelic Variants of the Gli-B1 Locus
title Heteroalleles in Common Wheat: Multiple Differences between Allelic Variants of the Gli-B1 Locus
title_full Heteroalleles in Common Wheat: Multiple Differences between Allelic Variants of the Gli-B1 Locus
title_fullStr Heteroalleles in Common Wheat: Multiple Differences between Allelic Variants of the Gli-B1 Locus
title_full_unstemmed Heteroalleles in Common Wheat: Multiple Differences between Allelic Variants of the Gli-B1 Locus
title_short Heteroalleles in Common Wheat: Multiple Differences between Allelic Variants of the Gli-B1 Locus
title_sort heteroalleles in common wheat: multiple differences between allelic variants of the gli-b1 locus
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7917834/
https://www.ncbi.nlm.nih.gov/pubmed/33673225
http://dx.doi.org/10.3390/ijms22041832
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