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Increased Expression of VANGL1 Is Predictive of Lymph Node Metastasis in Colorectal Cancer: Results from a 20-Gene Expression Signature
This study aimed at building a prognostic signature based on a candidate gene panel whose expression may be associated with lymph node metastasis (LNM), thus potentially able to predict colorectal cancer (CRC) progression and patient survival. The mRNA expression levels of 20 candidate genes were ev...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7918343/ https://www.ncbi.nlm.nih.gov/pubmed/33672900 http://dx.doi.org/10.3390/jpm11020126 |
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author | Peyravian, Noshad Nobili, Stefania Pezeshkian, Zahra Olfatifar, Meysam Moradi, Afshin Baghaei, Kaveh Anaraki, Fakhrosadat Nazari, Kimia Aghdaei, Hamid Asadzadeh Zali, Mohammad Reza Mini, Enrico Mojarad, Ehsan Nazemalhosseini |
author_facet | Peyravian, Noshad Nobili, Stefania Pezeshkian, Zahra Olfatifar, Meysam Moradi, Afshin Baghaei, Kaveh Anaraki, Fakhrosadat Nazari, Kimia Aghdaei, Hamid Asadzadeh Zali, Mohammad Reza Mini, Enrico Mojarad, Ehsan Nazemalhosseini |
author_sort | Peyravian, Noshad |
collection | PubMed |
description | This study aimed at building a prognostic signature based on a candidate gene panel whose expression may be associated with lymph node metastasis (LNM), thus potentially able to predict colorectal cancer (CRC) progression and patient survival. The mRNA expression levels of 20 candidate genes were evaluated by RT-qPCR in cancer and normal mucosa formalin-fixed paraffin-embedded (FFPE) tissues of CRC patients. Receiver operating characteristic curves were used to evaluate the prognosis performance of our model by calculating the area under the curve (AUC) values corresponding to stage and metastasis. A total of 100 FFPE primary tumor tissues from stage I–IV CRC patients were collected and analyzed. Among the 20 candidate genes we studied, only the expression levels of VANGL1 significantly varied between patients with and without LNMs (p = 0.02). Additionally, the AUC value of the 20-gene panel was found to have the highest predictive performance (i.e., AUC = 79.84%) for LNMs compared with that of two subpanels including 5 and 10 genes. According to our results, VANGL1 gene expression levels are able to estimate LNMs in different stages of CRC. After a proper validation in a wider case series, the evaluation of VANGL1 gene expression and that of the 20-gene panel signature could help in the future in the prediction of CRC progression. |
format | Online Article Text |
id | pubmed-7918343 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-79183432021-03-02 Increased Expression of VANGL1 Is Predictive of Lymph Node Metastasis in Colorectal Cancer: Results from a 20-Gene Expression Signature Peyravian, Noshad Nobili, Stefania Pezeshkian, Zahra Olfatifar, Meysam Moradi, Afshin Baghaei, Kaveh Anaraki, Fakhrosadat Nazari, Kimia Aghdaei, Hamid Asadzadeh Zali, Mohammad Reza Mini, Enrico Mojarad, Ehsan Nazemalhosseini J Pers Med Article This study aimed at building a prognostic signature based on a candidate gene panel whose expression may be associated with lymph node metastasis (LNM), thus potentially able to predict colorectal cancer (CRC) progression and patient survival. The mRNA expression levels of 20 candidate genes were evaluated by RT-qPCR in cancer and normal mucosa formalin-fixed paraffin-embedded (FFPE) tissues of CRC patients. Receiver operating characteristic curves were used to evaluate the prognosis performance of our model by calculating the area under the curve (AUC) values corresponding to stage and metastasis. A total of 100 FFPE primary tumor tissues from stage I–IV CRC patients were collected and analyzed. Among the 20 candidate genes we studied, only the expression levels of VANGL1 significantly varied between patients with and without LNMs (p = 0.02). Additionally, the AUC value of the 20-gene panel was found to have the highest predictive performance (i.e., AUC = 79.84%) for LNMs compared with that of two subpanels including 5 and 10 genes. According to our results, VANGL1 gene expression levels are able to estimate LNMs in different stages of CRC. After a proper validation in a wider case series, the evaluation of VANGL1 gene expression and that of the 20-gene panel signature could help in the future in the prediction of CRC progression. MDPI 2021-02-14 /pmc/articles/PMC7918343/ /pubmed/33672900 http://dx.doi.org/10.3390/jpm11020126 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Peyravian, Noshad Nobili, Stefania Pezeshkian, Zahra Olfatifar, Meysam Moradi, Afshin Baghaei, Kaveh Anaraki, Fakhrosadat Nazari, Kimia Aghdaei, Hamid Asadzadeh Zali, Mohammad Reza Mini, Enrico Mojarad, Ehsan Nazemalhosseini Increased Expression of VANGL1 Is Predictive of Lymph Node Metastasis in Colorectal Cancer: Results from a 20-Gene Expression Signature |
title | Increased Expression of VANGL1 Is Predictive of Lymph Node Metastasis in Colorectal Cancer: Results from a 20-Gene Expression Signature |
title_full | Increased Expression of VANGL1 Is Predictive of Lymph Node Metastasis in Colorectal Cancer: Results from a 20-Gene Expression Signature |
title_fullStr | Increased Expression of VANGL1 Is Predictive of Lymph Node Metastasis in Colorectal Cancer: Results from a 20-Gene Expression Signature |
title_full_unstemmed | Increased Expression of VANGL1 Is Predictive of Lymph Node Metastasis in Colorectal Cancer: Results from a 20-Gene Expression Signature |
title_short | Increased Expression of VANGL1 Is Predictive of Lymph Node Metastasis in Colorectal Cancer: Results from a 20-Gene Expression Signature |
title_sort | increased expression of vangl1 is predictive of lymph node metastasis in colorectal cancer: results from a 20-gene expression signature |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7918343/ https://www.ncbi.nlm.nih.gov/pubmed/33672900 http://dx.doi.org/10.3390/jpm11020126 |
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