Cargando…

Increased Expression of VANGL1 Is Predictive of Lymph Node Metastasis in Colorectal Cancer: Results from a 20-Gene Expression Signature

This study aimed at building a prognostic signature based on a candidate gene panel whose expression may be associated with lymph node metastasis (LNM), thus potentially able to predict colorectal cancer (CRC) progression and patient survival. The mRNA expression levels of 20 candidate genes were ev...

Descripción completa

Detalles Bibliográficos
Autores principales: Peyravian, Noshad, Nobili, Stefania, Pezeshkian, Zahra, Olfatifar, Meysam, Moradi, Afshin, Baghaei, Kaveh, Anaraki, Fakhrosadat, Nazari, Kimia, Aghdaei, Hamid Asadzadeh, Zali, Mohammad Reza, Mini, Enrico, Mojarad, Ehsan Nazemalhosseini
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7918343/
https://www.ncbi.nlm.nih.gov/pubmed/33672900
http://dx.doi.org/10.3390/jpm11020126
_version_ 1783657900999180288
author Peyravian, Noshad
Nobili, Stefania
Pezeshkian, Zahra
Olfatifar, Meysam
Moradi, Afshin
Baghaei, Kaveh
Anaraki, Fakhrosadat
Nazari, Kimia
Aghdaei, Hamid Asadzadeh
Zali, Mohammad Reza
Mini, Enrico
Mojarad, Ehsan Nazemalhosseini
author_facet Peyravian, Noshad
Nobili, Stefania
Pezeshkian, Zahra
Olfatifar, Meysam
Moradi, Afshin
Baghaei, Kaveh
Anaraki, Fakhrosadat
Nazari, Kimia
Aghdaei, Hamid Asadzadeh
Zali, Mohammad Reza
Mini, Enrico
Mojarad, Ehsan Nazemalhosseini
author_sort Peyravian, Noshad
collection PubMed
description This study aimed at building a prognostic signature based on a candidate gene panel whose expression may be associated with lymph node metastasis (LNM), thus potentially able to predict colorectal cancer (CRC) progression and patient survival. The mRNA expression levels of 20 candidate genes were evaluated by RT-qPCR in cancer and normal mucosa formalin-fixed paraffin-embedded (FFPE) tissues of CRC patients. Receiver operating characteristic curves were used to evaluate the prognosis performance of our model by calculating the area under the curve (AUC) values corresponding to stage and metastasis. A total of 100 FFPE primary tumor tissues from stage I–IV CRC patients were collected and analyzed. Among the 20 candidate genes we studied, only the expression levels of VANGL1 significantly varied between patients with and without LNMs (p = 0.02). Additionally, the AUC value of the 20-gene panel was found to have the highest predictive performance (i.e., AUC = 79.84%) for LNMs compared with that of two subpanels including 5 and 10 genes. According to our results, VANGL1 gene expression levels are able to estimate LNMs in different stages of CRC. After a proper validation in a wider case series, the evaluation of VANGL1 gene expression and that of the 20-gene panel signature could help in the future in the prediction of CRC progression.
format Online
Article
Text
id pubmed-7918343
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-79183432021-03-02 Increased Expression of VANGL1 Is Predictive of Lymph Node Metastasis in Colorectal Cancer: Results from a 20-Gene Expression Signature Peyravian, Noshad Nobili, Stefania Pezeshkian, Zahra Olfatifar, Meysam Moradi, Afshin Baghaei, Kaveh Anaraki, Fakhrosadat Nazari, Kimia Aghdaei, Hamid Asadzadeh Zali, Mohammad Reza Mini, Enrico Mojarad, Ehsan Nazemalhosseini J Pers Med Article This study aimed at building a prognostic signature based on a candidate gene panel whose expression may be associated with lymph node metastasis (LNM), thus potentially able to predict colorectal cancer (CRC) progression and patient survival. The mRNA expression levels of 20 candidate genes were evaluated by RT-qPCR in cancer and normal mucosa formalin-fixed paraffin-embedded (FFPE) tissues of CRC patients. Receiver operating characteristic curves were used to evaluate the prognosis performance of our model by calculating the area under the curve (AUC) values corresponding to stage and metastasis. A total of 100 FFPE primary tumor tissues from stage I–IV CRC patients were collected and analyzed. Among the 20 candidate genes we studied, only the expression levels of VANGL1 significantly varied between patients with and without LNMs (p = 0.02). Additionally, the AUC value of the 20-gene panel was found to have the highest predictive performance (i.e., AUC = 79.84%) for LNMs compared with that of two subpanels including 5 and 10 genes. According to our results, VANGL1 gene expression levels are able to estimate LNMs in different stages of CRC. After a proper validation in a wider case series, the evaluation of VANGL1 gene expression and that of the 20-gene panel signature could help in the future in the prediction of CRC progression. MDPI 2021-02-14 /pmc/articles/PMC7918343/ /pubmed/33672900 http://dx.doi.org/10.3390/jpm11020126 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Peyravian, Noshad
Nobili, Stefania
Pezeshkian, Zahra
Olfatifar, Meysam
Moradi, Afshin
Baghaei, Kaveh
Anaraki, Fakhrosadat
Nazari, Kimia
Aghdaei, Hamid Asadzadeh
Zali, Mohammad Reza
Mini, Enrico
Mojarad, Ehsan Nazemalhosseini
Increased Expression of VANGL1 Is Predictive of Lymph Node Metastasis in Colorectal Cancer: Results from a 20-Gene Expression Signature
title Increased Expression of VANGL1 Is Predictive of Lymph Node Metastasis in Colorectal Cancer: Results from a 20-Gene Expression Signature
title_full Increased Expression of VANGL1 Is Predictive of Lymph Node Metastasis in Colorectal Cancer: Results from a 20-Gene Expression Signature
title_fullStr Increased Expression of VANGL1 Is Predictive of Lymph Node Metastasis in Colorectal Cancer: Results from a 20-Gene Expression Signature
title_full_unstemmed Increased Expression of VANGL1 Is Predictive of Lymph Node Metastasis in Colorectal Cancer: Results from a 20-Gene Expression Signature
title_short Increased Expression of VANGL1 Is Predictive of Lymph Node Metastasis in Colorectal Cancer: Results from a 20-Gene Expression Signature
title_sort increased expression of vangl1 is predictive of lymph node metastasis in colorectal cancer: results from a 20-gene expression signature
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7918343/
https://www.ncbi.nlm.nih.gov/pubmed/33672900
http://dx.doi.org/10.3390/jpm11020126
work_keys_str_mv AT peyraviannoshad increasedexpressionofvangl1ispredictiveoflymphnodemetastasisincolorectalcancerresultsfroma20geneexpressionsignature
AT nobilistefania increasedexpressionofvangl1ispredictiveoflymphnodemetastasisincolorectalcancerresultsfroma20geneexpressionsignature
AT pezeshkianzahra increasedexpressionofvangl1ispredictiveoflymphnodemetastasisincolorectalcancerresultsfroma20geneexpressionsignature
AT olfatifarmeysam increasedexpressionofvangl1ispredictiveoflymphnodemetastasisincolorectalcancerresultsfroma20geneexpressionsignature
AT moradiafshin increasedexpressionofvangl1ispredictiveoflymphnodemetastasisincolorectalcancerresultsfroma20geneexpressionsignature
AT baghaeikaveh increasedexpressionofvangl1ispredictiveoflymphnodemetastasisincolorectalcancerresultsfroma20geneexpressionsignature
AT anarakifakhrosadat increasedexpressionofvangl1ispredictiveoflymphnodemetastasisincolorectalcancerresultsfroma20geneexpressionsignature
AT nazarikimia increasedexpressionofvangl1ispredictiveoflymphnodemetastasisincolorectalcancerresultsfroma20geneexpressionsignature
AT aghdaeihamidasadzadeh increasedexpressionofvangl1ispredictiveoflymphnodemetastasisincolorectalcancerresultsfroma20geneexpressionsignature
AT zalimohammadreza increasedexpressionofvangl1ispredictiveoflymphnodemetastasisincolorectalcancerresultsfroma20geneexpressionsignature
AT minienrico increasedexpressionofvangl1ispredictiveoflymphnodemetastasisincolorectalcancerresultsfroma20geneexpressionsignature
AT mojaradehsannazemalhosseini increasedexpressionofvangl1ispredictiveoflymphnodemetastasisincolorectalcancerresultsfroma20geneexpressionsignature