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Localized end-of-outbreak determination for coronavirus disease 2019 (COVID-19): examples from clusters in Japan

OBJECTIVES: End-of-outbreak declarations are an important component of outbreak response because they indicate that public health and social interventions may be relaxed or lapsed. Our study aimed to assess end-of-outbreak probabilities for clusters of coronavirus disease 2019 (COVID-19) cases detec...

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Autores principales: Linton, Natalie M., Akhmetzhanov, Andrei R., Nishiura, Hiroshi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Published by Elsevier Ltd on behalf of International Society for Infectious Diseases. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7919508/
https://www.ncbi.nlm.nih.gov/pubmed/33662600
http://dx.doi.org/10.1016/j.ijid.2021.02.106
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author Linton, Natalie M.
Akhmetzhanov, Andrei R.
Nishiura, Hiroshi
author_facet Linton, Natalie M.
Akhmetzhanov, Andrei R.
Nishiura, Hiroshi
author_sort Linton, Natalie M.
collection PubMed
description OBJECTIVES: End-of-outbreak declarations are an important component of outbreak response because they indicate that public health and social interventions may be relaxed or lapsed. Our study aimed to assess end-of-outbreak probabilities for clusters of coronavirus disease 2019 (COVID-19) cases detected during the first wave of the COVID-19 pandemic in Japan. METHODS: A statistical model for end-of-outbreak determination, which accounted for reporting delays for new cases, was computed. Four clusters, representing different social contexts and time points during the first wave of the epidemic, were selected and their end-of-outbreak probabilities were evaluated. RESULTS: The speed of end-of-outbreak determination was most closely tied to outbreak size. Notably, accounting underascertainment of cases led to later end-of-outbreak determinations. In addition, end-of-outbreak determination was closely related to estimates of case dispersionk and the effective reproduction number [Formula: see text]. Increasing local transmission ([Formula: see text]) leads to greater uncertainty in the probability estimates. CONCLUSIONS: When public health measures are effective, lower [Formula: see text] (less transmission on average) and larger k (lower risk of superspreading) will be in effect, and end-of-outbreak determinations can be declared with greater confidence. The application of end-of-outbreak probabilities can help distinguish between local extinction and low levels of transmission, and communicating these end-of-outbreak probabilities can help inform public health decision making with regard to the appropriate use of resources.
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spelling pubmed-79195082021-03-01 Localized end-of-outbreak determination for coronavirus disease 2019 (COVID-19): examples from clusters in Japan Linton, Natalie M. Akhmetzhanov, Andrei R. Nishiura, Hiroshi Int J Infect Dis Article OBJECTIVES: End-of-outbreak declarations are an important component of outbreak response because they indicate that public health and social interventions may be relaxed or lapsed. Our study aimed to assess end-of-outbreak probabilities for clusters of coronavirus disease 2019 (COVID-19) cases detected during the first wave of the COVID-19 pandemic in Japan. METHODS: A statistical model for end-of-outbreak determination, which accounted for reporting delays for new cases, was computed. Four clusters, representing different social contexts and time points during the first wave of the epidemic, were selected and their end-of-outbreak probabilities were evaluated. RESULTS: The speed of end-of-outbreak determination was most closely tied to outbreak size. Notably, accounting underascertainment of cases led to later end-of-outbreak determinations. In addition, end-of-outbreak determination was closely related to estimates of case dispersionk and the effective reproduction number [Formula: see text]. Increasing local transmission ([Formula: see text]) leads to greater uncertainty in the probability estimates. CONCLUSIONS: When public health measures are effective, lower [Formula: see text] (less transmission on average) and larger k (lower risk of superspreading) will be in effect, and end-of-outbreak determinations can be declared with greater confidence. The application of end-of-outbreak probabilities can help distinguish between local extinction and low levels of transmission, and communicating these end-of-outbreak probabilities can help inform public health decision making with regard to the appropriate use of resources. The Authors. Published by Elsevier Ltd on behalf of International Society for Infectious Diseases. 2021-04 2021-03-01 /pmc/articles/PMC7919508/ /pubmed/33662600 http://dx.doi.org/10.1016/j.ijid.2021.02.106 Text en © 2021 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Linton, Natalie M.
Akhmetzhanov, Andrei R.
Nishiura, Hiroshi
Localized end-of-outbreak determination for coronavirus disease 2019 (COVID-19): examples from clusters in Japan
title Localized end-of-outbreak determination for coronavirus disease 2019 (COVID-19): examples from clusters in Japan
title_full Localized end-of-outbreak determination for coronavirus disease 2019 (COVID-19): examples from clusters in Japan
title_fullStr Localized end-of-outbreak determination for coronavirus disease 2019 (COVID-19): examples from clusters in Japan
title_full_unstemmed Localized end-of-outbreak determination for coronavirus disease 2019 (COVID-19): examples from clusters in Japan
title_short Localized end-of-outbreak determination for coronavirus disease 2019 (COVID-19): examples from clusters in Japan
title_sort localized end-of-outbreak determination for coronavirus disease 2019 (covid-19): examples from clusters in japan
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7919508/
https://www.ncbi.nlm.nih.gov/pubmed/33662600
http://dx.doi.org/10.1016/j.ijid.2021.02.106
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