BC-store: A program for MGISEQ barcode sets analysis

Here we present the devised BC-store–a program for analyzing and selecting sets of barcodes for sequencing on platforms manufactured by MGI Tech (China). The app is available as an open source in Python3 and as a desktop version. The application allows analyzing the compatibility of barcodes on a si...

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Detalles Bibliográficos
Autores principales: Bulusheva, Irina, Belova, Vera, Nikashin, Boris, Korostin, Dmitriy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7920359/
https://www.ncbi.nlm.nih.gov/pubmed/33647037
http://dx.doi.org/10.1371/journal.pone.0247532
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author Bulusheva, Irina
Belova, Vera
Nikashin, Boris
Korostin, Dmitriy
author_facet Bulusheva, Irina
Belova, Vera
Nikashin, Boris
Korostin, Dmitriy
author_sort Bulusheva, Irina
collection PubMed
description Here we present the devised BC-store–a program for analyzing and selecting sets of barcodes for sequencing on platforms manufactured by MGI Tech (China). The app is available as an open source in Python3 and as a desktop version. The application allows analyzing the compatibility of barcodes on a single lane of a flow cell in a set in the case of equal and arbitrary fractions. In addition, with the help of this tool barcodes can be added to an existing set with custom share options. In this paper we describe how BC-store works for different tasks and consider the effectiveness of using BC-store in sequence lab routine tasks.
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spelling pubmed-79203592021-03-09 BC-store: A program for MGISEQ barcode sets analysis Bulusheva, Irina Belova, Vera Nikashin, Boris Korostin, Dmitriy PLoS One Research Article Here we present the devised BC-store–a program for analyzing and selecting sets of barcodes for sequencing on platforms manufactured by MGI Tech (China). The app is available as an open source in Python3 and as a desktop version. The application allows analyzing the compatibility of barcodes on a single lane of a flow cell in a set in the case of equal and arbitrary fractions. In addition, with the help of this tool barcodes can be added to an existing set with custom share options. In this paper we describe how BC-store works for different tasks and consider the effectiveness of using BC-store in sequence lab routine tasks. Public Library of Science 2021-03-01 /pmc/articles/PMC7920359/ /pubmed/33647037 http://dx.doi.org/10.1371/journal.pone.0247532 Text en © 2021 Bulusheva et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Bulusheva, Irina
Belova, Vera
Nikashin, Boris
Korostin, Dmitriy
BC-store: A program for MGISEQ barcode sets analysis
title BC-store: A program for MGISEQ barcode sets analysis
title_full BC-store: A program for MGISEQ barcode sets analysis
title_fullStr BC-store: A program for MGISEQ barcode sets analysis
title_full_unstemmed BC-store: A program for MGISEQ barcode sets analysis
title_short BC-store: A program for MGISEQ barcode sets analysis
title_sort bc-store: a program for mgiseq barcode sets analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7920359/
https://www.ncbi.nlm.nih.gov/pubmed/33647037
http://dx.doi.org/10.1371/journal.pone.0247532
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