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Developing Machine-Learning Prediction Algorithm for Bacteremia in Admitted Patients

PURPOSE: Bloodstream infection among hospitalized patients is associated with serious adverse outcomes. Blood culture is routinely ordered in patients with suspected infections, although 90% of blood cultures do not show any growth of organisms. The evidence regarding the prediction of bacteremia is...

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Autores principales: Mahmoud, Ebrahim, Al Dhoayan, Mohammed, Bosaeed, Mohammad, Al Johani, Sameera, Arabi, Yaseen M
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7920583/
https://www.ncbi.nlm.nih.gov/pubmed/33658812
http://dx.doi.org/10.2147/IDR.S293496
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author Mahmoud, Ebrahim
Al Dhoayan, Mohammed
Bosaeed, Mohammad
Al Johani, Sameera
Arabi, Yaseen M
author_facet Mahmoud, Ebrahim
Al Dhoayan, Mohammed
Bosaeed, Mohammad
Al Johani, Sameera
Arabi, Yaseen M
author_sort Mahmoud, Ebrahim
collection PubMed
description PURPOSE: Bloodstream infection among hospitalized patients is associated with serious adverse outcomes. Blood culture is routinely ordered in patients with suspected infections, although 90% of blood cultures do not show any growth of organisms. The evidence regarding the prediction of bacteremia is scarce. PATIENTS AND METHODS: A retrospective review of blood cultures requested for a cohort of admitted patients between 2017 and 2019 was undertaken. Several machine-learning models were used to identify the best prediction model. Additionally, univariate and multivariable logistic regression was used to determine the predictive factors for bacteremia. RESULTS: A total of 36,405 blood cultures of 7157 patients were done. There were 2413 (6.62%) positive blood cultures. The best prediction was by using NN with the high specificity of 88% but low sensitivity. There was a statistical difference in the following factors: longer admission days before the blood culture, presence of a central line, and higher lactic acid—more than 2 mmol/L. CONCLUSION: Despite the low positive rate of blood culture, machine learning could predict positive blood culture with high specificity but minimum sensitivity. Yet, the SIRS score, qSOFA score, and other known factors were not good prognostic factors. Further improvement and training would possibly enhance machine-learning performance.
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spelling pubmed-79205832021-03-02 Developing Machine-Learning Prediction Algorithm for Bacteremia in Admitted Patients Mahmoud, Ebrahim Al Dhoayan, Mohammed Bosaeed, Mohammad Al Johani, Sameera Arabi, Yaseen M Infect Drug Resist Original Research PURPOSE: Bloodstream infection among hospitalized patients is associated with serious adverse outcomes. Blood culture is routinely ordered in patients with suspected infections, although 90% of blood cultures do not show any growth of organisms. The evidence regarding the prediction of bacteremia is scarce. PATIENTS AND METHODS: A retrospective review of blood cultures requested for a cohort of admitted patients between 2017 and 2019 was undertaken. Several machine-learning models were used to identify the best prediction model. Additionally, univariate and multivariable logistic regression was used to determine the predictive factors for bacteremia. RESULTS: A total of 36,405 blood cultures of 7157 patients were done. There were 2413 (6.62%) positive blood cultures. The best prediction was by using NN with the high specificity of 88% but low sensitivity. There was a statistical difference in the following factors: longer admission days before the blood culture, presence of a central line, and higher lactic acid—more than 2 mmol/L. CONCLUSION: Despite the low positive rate of blood culture, machine learning could predict positive blood culture with high specificity but minimum sensitivity. Yet, the SIRS score, qSOFA score, and other known factors were not good prognostic factors. Further improvement and training would possibly enhance machine-learning performance. Dove 2021-02-25 /pmc/articles/PMC7920583/ /pubmed/33658812 http://dx.doi.org/10.2147/IDR.S293496 Text en © 2021 Mahmoud et al. http://creativecommons.org/licenses/by-nc/3.0/ This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php).
spellingShingle Original Research
Mahmoud, Ebrahim
Al Dhoayan, Mohammed
Bosaeed, Mohammad
Al Johani, Sameera
Arabi, Yaseen M
Developing Machine-Learning Prediction Algorithm for Bacteremia in Admitted Patients
title Developing Machine-Learning Prediction Algorithm for Bacteremia in Admitted Patients
title_full Developing Machine-Learning Prediction Algorithm for Bacteremia in Admitted Patients
title_fullStr Developing Machine-Learning Prediction Algorithm for Bacteremia in Admitted Patients
title_full_unstemmed Developing Machine-Learning Prediction Algorithm for Bacteremia in Admitted Patients
title_short Developing Machine-Learning Prediction Algorithm for Bacteremia in Admitted Patients
title_sort developing machine-learning prediction algorithm for bacteremia in admitted patients
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7920583/
https://www.ncbi.nlm.nih.gov/pubmed/33658812
http://dx.doi.org/10.2147/IDR.S293496
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