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A causal framework to determine the effectiveness of dynamic quarantine policy to mitigate COVID-19

Since the start of the pandemic caused by the novel coronavirus, COVID-19, more than 106 million people have been infected and global deaths have surpassed 2.4 million. In Chile, the government restricted the activities and movement of people, organizations, and companies, under the concept of dynam...

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Detalles Bibliográficos
Autores principales: Kristjanpoller, Werner, Michell, Kevin, Minutolo, Marcel C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7920818/
https://www.ncbi.nlm.nih.gov/pubmed/33679272
http://dx.doi.org/10.1016/j.asoc.2021.107241
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author Kristjanpoller, Werner
Michell, Kevin
Minutolo, Marcel C.
author_facet Kristjanpoller, Werner
Michell, Kevin
Minutolo, Marcel C.
author_sort Kristjanpoller, Werner
collection PubMed
description Since the start of the pandemic caused by the novel coronavirus, COVID-19, more than 106 million people have been infected and global deaths have surpassed 2.4 million. In Chile, the government restricted the activities and movement of people, organizations, and companies, under the concept of dynamic quarantine across municipalities for a predefined period of time. Chile is an interesting context to study because reports to have a higher quantity of infections per million people as well as a higher number of polymerize chain reaction (PCR) tests per million people. The higher testing rate means that Chile has good measurement of the contagious compared to other countries. Further, the heterogeneity of the social, economic, and demographic variables collected of each Chilean municipality provides a robust set of control data to better explain the contagious rate for each city. In this paper, we propose a framework to determine the effectiveness of the dynamic quarantine policy by analyzing different causal models (meta-learners and causal forest) including a time series pattern related to effective reproductive number. Additionally, we test the ability of the proposed framework to understand and explain the spread over benchmark traditional models and to interpret the Shapley Additive Explanations (SHAP) plots. The conclusions derived from the proposed framework provide important scientific information for government policymakers in disease control strategies, not only to analyze COVID-19 but to have a better model to determine social interventions for future outbreaks.
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spelling pubmed-79208182021-03-02 A causal framework to determine the effectiveness of dynamic quarantine policy to mitigate COVID-19 Kristjanpoller, Werner Michell, Kevin Minutolo, Marcel C. Appl Soft Comput Article Since the start of the pandemic caused by the novel coronavirus, COVID-19, more than 106 million people have been infected and global deaths have surpassed 2.4 million. In Chile, the government restricted the activities and movement of people, organizations, and companies, under the concept of dynamic quarantine across municipalities for a predefined period of time. Chile is an interesting context to study because reports to have a higher quantity of infections per million people as well as a higher number of polymerize chain reaction (PCR) tests per million people. The higher testing rate means that Chile has good measurement of the contagious compared to other countries. Further, the heterogeneity of the social, economic, and demographic variables collected of each Chilean municipality provides a robust set of control data to better explain the contagious rate for each city. In this paper, we propose a framework to determine the effectiveness of the dynamic quarantine policy by analyzing different causal models (meta-learners and causal forest) including a time series pattern related to effective reproductive number. Additionally, we test the ability of the proposed framework to understand and explain the spread over benchmark traditional models and to interpret the Shapley Additive Explanations (SHAP) plots. The conclusions derived from the proposed framework provide important scientific information for government policymakers in disease control strategies, not only to analyze COVID-19 but to have a better model to determine social interventions for future outbreaks. Elsevier B.V. 2021-06 2021-03-02 /pmc/articles/PMC7920818/ /pubmed/33679272 http://dx.doi.org/10.1016/j.asoc.2021.107241 Text en © 2021 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Kristjanpoller, Werner
Michell, Kevin
Minutolo, Marcel C.
A causal framework to determine the effectiveness of dynamic quarantine policy to mitigate COVID-19
title A causal framework to determine the effectiveness of dynamic quarantine policy to mitigate COVID-19
title_full A causal framework to determine the effectiveness of dynamic quarantine policy to mitigate COVID-19
title_fullStr A causal framework to determine the effectiveness of dynamic quarantine policy to mitigate COVID-19
title_full_unstemmed A causal framework to determine the effectiveness of dynamic quarantine policy to mitigate COVID-19
title_short A causal framework to determine the effectiveness of dynamic quarantine policy to mitigate COVID-19
title_sort causal framework to determine the effectiveness of dynamic quarantine policy to mitigate covid-19
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7920818/
https://www.ncbi.nlm.nih.gov/pubmed/33679272
http://dx.doi.org/10.1016/j.asoc.2021.107241
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