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Deep learning approaches for challenging species and gender identification of mosquito vectors

Microscopic observation of mosquito species, which is the basis of morphological identification, is a time-consuming and challenging process, particularly owing to the different skills and experience of public health personnel. We present deep learning models based on the well-known you-only-look-on...

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Autores principales: Kittichai, Veerayuth, Pengsakul, Theerakamol, Chumchuen, Kemmapon, Samung, Yudthana, Sriwichai, Patchara, Phatthamolrat, Natthaphop, Tongloy, Teerawat, Jaksukam, Komgrit, Chuwongin, Santhad, Boonsang, Siridech
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7921658/
https://www.ncbi.nlm.nih.gov/pubmed/33649429
http://dx.doi.org/10.1038/s41598-021-84219-4
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author Kittichai, Veerayuth
Pengsakul, Theerakamol
Chumchuen, Kemmapon
Samung, Yudthana
Sriwichai, Patchara
Phatthamolrat, Natthaphop
Tongloy, Teerawat
Jaksukam, Komgrit
Chuwongin, Santhad
Boonsang, Siridech
author_facet Kittichai, Veerayuth
Pengsakul, Theerakamol
Chumchuen, Kemmapon
Samung, Yudthana
Sriwichai, Patchara
Phatthamolrat, Natthaphop
Tongloy, Teerawat
Jaksukam, Komgrit
Chuwongin, Santhad
Boonsang, Siridech
author_sort Kittichai, Veerayuth
collection PubMed
description Microscopic observation of mosquito species, which is the basis of morphological identification, is a time-consuming and challenging process, particularly owing to the different skills and experience of public health personnel. We present deep learning models based on the well-known you-only-look-once (YOLO) algorithm. This model can be used to simultaneously classify and localize the images to identify the species of the gender of field-caught mosquitoes. The results indicated that the concatenated two YOLO v3 model exhibited the optimal performance in identifying the mosquitoes, as the mosquitoes were relatively small objects compared with the large proportional environment image. The robustness testing of the proposed model yielded a mean average precision and sensitivity of 99% and 92.4%, respectively. The model exhibited high performance in terms of the specificity and accuracy, with an extremely low rate of misclassification. The area under the receiver operating characteristic curve (AUC) was 0.958 ± 0.011, which further demonstrated the model accuracy. Thirteen classes were detected with an accuracy of 100% based on a confusion matrix. Nevertheless, the relatively low detection rates for the two species were likely a result of the limited number of wild-caught biological samples available. The proposed model can help establish the population densities of mosquito vectors in remote areas to predict disease outbreaks in advance.
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spelling pubmed-79216582021-03-02 Deep learning approaches for challenging species and gender identification of mosquito vectors Kittichai, Veerayuth Pengsakul, Theerakamol Chumchuen, Kemmapon Samung, Yudthana Sriwichai, Patchara Phatthamolrat, Natthaphop Tongloy, Teerawat Jaksukam, Komgrit Chuwongin, Santhad Boonsang, Siridech Sci Rep Article Microscopic observation of mosquito species, which is the basis of morphological identification, is a time-consuming and challenging process, particularly owing to the different skills and experience of public health personnel. We present deep learning models based on the well-known you-only-look-once (YOLO) algorithm. This model can be used to simultaneously classify and localize the images to identify the species of the gender of field-caught mosquitoes. The results indicated that the concatenated two YOLO v3 model exhibited the optimal performance in identifying the mosquitoes, as the mosquitoes were relatively small objects compared with the large proportional environment image. The robustness testing of the proposed model yielded a mean average precision and sensitivity of 99% and 92.4%, respectively. The model exhibited high performance in terms of the specificity and accuracy, with an extremely low rate of misclassification. The area under the receiver operating characteristic curve (AUC) was 0.958 ± 0.011, which further demonstrated the model accuracy. Thirteen classes were detected with an accuracy of 100% based on a confusion matrix. Nevertheless, the relatively low detection rates for the two species were likely a result of the limited number of wild-caught biological samples available. The proposed model can help establish the population densities of mosquito vectors in remote areas to predict disease outbreaks in advance. Nature Publishing Group UK 2021-03-01 /pmc/articles/PMC7921658/ /pubmed/33649429 http://dx.doi.org/10.1038/s41598-021-84219-4 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Kittichai, Veerayuth
Pengsakul, Theerakamol
Chumchuen, Kemmapon
Samung, Yudthana
Sriwichai, Patchara
Phatthamolrat, Natthaphop
Tongloy, Teerawat
Jaksukam, Komgrit
Chuwongin, Santhad
Boonsang, Siridech
Deep learning approaches for challenging species and gender identification of mosquito vectors
title Deep learning approaches for challenging species and gender identification of mosquito vectors
title_full Deep learning approaches for challenging species and gender identification of mosquito vectors
title_fullStr Deep learning approaches for challenging species and gender identification of mosquito vectors
title_full_unstemmed Deep learning approaches for challenging species and gender identification of mosquito vectors
title_short Deep learning approaches for challenging species and gender identification of mosquito vectors
title_sort deep learning approaches for challenging species and gender identification of mosquito vectors
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7921658/
https://www.ncbi.nlm.nih.gov/pubmed/33649429
http://dx.doi.org/10.1038/s41598-021-84219-4
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