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Gene Regulatory Network of ETS Domain Transcription Factors in Different Stages of Glioma
The ETS domain family of transcription factors is involved in a number of biological processes, and is commonly misregulated in various forms of cancer. Using microarray datasets from patients with different grades of glioma, we have analyzed the expression profiles of various ETS genes, and have id...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7922321/ https://www.ncbi.nlm.nih.gov/pubmed/33671331 http://dx.doi.org/10.3390/jpm11020138 |
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author | Babal, Yigit Koray Kandemir, Basak Kurnaz, Isil Aksan |
author_facet | Babal, Yigit Koray Kandemir, Basak Kurnaz, Isil Aksan |
author_sort | Babal, Yigit Koray |
collection | PubMed |
description | The ETS domain family of transcription factors is involved in a number of biological processes, and is commonly misregulated in various forms of cancer. Using microarray datasets from patients with different grades of glioma, we have analyzed the expression profiles of various ETS genes, and have identified ETV1, ELK3, ETV4, ELF4, and ETV6 as novel biomarkers for the identification of different glioma grades. We have further analyzed the gene regulatory networks of ETS transcription factors and compared them to previous microarray studies, where Elk-1-VP16 or PEA3-VP16 were overexpressed in neuroblastoma cell lines, and we identify unique and common regulatory networks for these ETS proteins. |
format | Online Article Text |
id | pubmed-7922321 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-79223212021-03-03 Gene Regulatory Network of ETS Domain Transcription Factors in Different Stages of Glioma Babal, Yigit Koray Kandemir, Basak Kurnaz, Isil Aksan J Pers Med Article The ETS domain family of transcription factors is involved in a number of biological processes, and is commonly misregulated in various forms of cancer. Using microarray datasets from patients with different grades of glioma, we have analyzed the expression profiles of various ETS genes, and have identified ETV1, ELK3, ETV4, ELF4, and ETV6 as novel biomarkers for the identification of different glioma grades. We have further analyzed the gene regulatory networks of ETS transcription factors and compared them to previous microarray studies, where Elk-1-VP16 or PEA3-VP16 were overexpressed in neuroblastoma cell lines, and we identify unique and common regulatory networks for these ETS proteins. MDPI 2021-02-17 /pmc/articles/PMC7922321/ /pubmed/33671331 http://dx.doi.org/10.3390/jpm11020138 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Babal, Yigit Koray Kandemir, Basak Kurnaz, Isil Aksan Gene Regulatory Network of ETS Domain Transcription Factors in Different Stages of Glioma |
title | Gene Regulatory Network of ETS Domain Transcription Factors in Different Stages of Glioma |
title_full | Gene Regulatory Network of ETS Domain Transcription Factors in Different Stages of Glioma |
title_fullStr | Gene Regulatory Network of ETS Domain Transcription Factors in Different Stages of Glioma |
title_full_unstemmed | Gene Regulatory Network of ETS Domain Transcription Factors in Different Stages of Glioma |
title_short | Gene Regulatory Network of ETS Domain Transcription Factors in Different Stages of Glioma |
title_sort | gene regulatory network of ets domain transcription factors in different stages of glioma |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7922321/ https://www.ncbi.nlm.nih.gov/pubmed/33671331 http://dx.doi.org/10.3390/jpm11020138 |
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