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Expression and Prognostic Characteristics of m6A RNA Methylation Regulators in Colon Cancer

Colon cancer is a common and leading cause of death and malignancy worldwide. N6-methylation of adenosine (m6A) is the most common reversible mRNA modification in eukaryotes, and it plays a crucial role in various biological functions in vivo. Dysregulated expression and genetic changes of m6A regul...

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Autores principales: Huang, Liting, Zhu, Jie, Kong, Weikaixin, Li, Peifeng, Zhu, Sujie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7926939/
https://www.ncbi.nlm.nih.gov/pubmed/33670062
http://dx.doi.org/10.3390/ijms22042134
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author Huang, Liting
Zhu, Jie
Kong, Weikaixin
Li, Peifeng
Zhu, Sujie
author_facet Huang, Liting
Zhu, Jie
Kong, Weikaixin
Li, Peifeng
Zhu, Sujie
author_sort Huang, Liting
collection PubMed
description Colon cancer is a common and leading cause of death and malignancy worldwide. N6-methylation of adenosine (m6A) is the most common reversible mRNA modification in eukaryotes, and it plays a crucial role in various biological functions in vivo. Dysregulated expression and genetic changes of m6A regulators have been correlated with tumorigenesis, cancer cell proliferation, tumor microenvironment, and prognosis in cancers. This study used RNA-seq and colon cancer clinical data to explore the relationship between N6-methylation and colon cancer. Based on the seven m6A regulators related to prognosis, three molecular subgroups of colon cancer were identified. Surprisingly, we found that each subgroup had unique survival characteristics. We then identified three subtypes of tumors based on 299 m6A phenotype-related genes, and one subtype was characterized as an immunosuppressive tumor and patients in this subtype may be more suitable for immunotherapy than other subtypes. Finally, using m6A-related genes and clinical information from The Cancer Genome Atlas cohort, we constructed a prognosis model, and this model could be used to predict the prognosis of patients in clinics.
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spelling pubmed-79269392021-03-04 Expression and Prognostic Characteristics of m6A RNA Methylation Regulators in Colon Cancer Huang, Liting Zhu, Jie Kong, Weikaixin Li, Peifeng Zhu, Sujie Int J Mol Sci Article Colon cancer is a common and leading cause of death and malignancy worldwide. N6-methylation of adenosine (m6A) is the most common reversible mRNA modification in eukaryotes, and it plays a crucial role in various biological functions in vivo. Dysregulated expression and genetic changes of m6A regulators have been correlated with tumorigenesis, cancer cell proliferation, tumor microenvironment, and prognosis in cancers. This study used RNA-seq and colon cancer clinical data to explore the relationship between N6-methylation and colon cancer. Based on the seven m6A regulators related to prognosis, three molecular subgroups of colon cancer were identified. Surprisingly, we found that each subgroup had unique survival characteristics. We then identified three subtypes of tumors based on 299 m6A phenotype-related genes, and one subtype was characterized as an immunosuppressive tumor and patients in this subtype may be more suitable for immunotherapy than other subtypes. Finally, using m6A-related genes and clinical information from The Cancer Genome Atlas cohort, we constructed a prognosis model, and this model could be used to predict the prognosis of patients in clinics. MDPI 2021-02-21 /pmc/articles/PMC7926939/ /pubmed/33670062 http://dx.doi.org/10.3390/ijms22042134 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Huang, Liting
Zhu, Jie
Kong, Weikaixin
Li, Peifeng
Zhu, Sujie
Expression and Prognostic Characteristics of m6A RNA Methylation Regulators in Colon Cancer
title Expression and Prognostic Characteristics of m6A RNA Methylation Regulators in Colon Cancer
title_full Expression and Prognostic Characteristics of m6A RNA Methylation Regulators in Colon Cancer
title_fullStr Expression and Prognostic Characteristics of m6A RNA Methylation Regulators in Colon Cancer
title_full_unstemmed Expression and Prognostic Characteristics of m6A RNA Methylation Regulators in Colon Cancer
title_short Expression and Prognostic Characteristics of m6A RNA Methylation Regulators in Colon Cancer
title_sort expression and prognostic characteristics of m6a rna methylation regulators in colon cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7926939/
https://www.ncbi.nlm.nih.gov/pubmed/33670062
http://dx.doi.org/10.3390/ijms22042134
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