Characterization of the complete chloroplast genome of Farfugium japonicum (Asteraceae)

The complete chloroplast genome of Farfugium japonicum, which belongs to tribe Senecioneae (Asteraceae) was characterized. The size of the chloroplast genome is 151,222 bp in length with a large single copy (LSC) of 83,417 bp, a small single copy (SSC) of 18,125 bp, and a pair of inverted repeats of...

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Autores principales: Gu, Ye, Ma, Qing, Lu, Yin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7927999/
https://www.ncbi.nlm.nih.gov/pubmed/33763547
http://dx.doi.org/10.1080/23802359.2021.1881928
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author Gu, Ye
Ma, Qing
Lu, Yin
author_facet Gu, Ye
Ma, Qing
Lu, Yin
author_sort Gu, Ye
collection PubMed
description The complete chloroplast genome of Farfugium japonicum, which belongs to tribe Senecioneae (Asteraceae) was characterized. The size of the chloroplast genome is 151,222 bp in length with a large single copy (LSC) of 83,417 bp, a small single copy (SSC) of 18,125 bp, and a pair of inverted repeats of 24,840 bp. The chloroplast genome encodes a set of 133 genes, including 88 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenomic analysis based on chloroplast genomes of 18 related species revealed that F. japonicum is clustered with species from Ligularia and rooted with the other Senecioneae genus. The chloroplast genome of Farfugium japonicum provides an important resource for further study of molecular evolution.
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spelling pubmed-79279992021-03-23 Characterization of the complete chloroplast genome of Farfugium japonicum (Asteraceae) Gu, Ye Ma, Qing Lu, Yin Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome of Farfugium japonicum, which belongs to tribe Senecioneae (Asteraceae) was characterized. The size of the chloroplast genome is 151,222 bp in length with a large single copy (LSC) of 83,417 bp, a small single copy (SSC) of 18,125 bp, and a pair of inverted repeats of 24,840 bp. The chloroplast genome encodes a set of 133 genes, including 88 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenomic analysis based on chloroplast genomes of 18 related species revealed that F. japonicum is clustered with species from Ligularia and rooted with the other Senecioneae genus. The chloroplast genome of Farfugium japonicum provides an important resource for further study of molecular evolution. Taylor & Francis 2021-03-01 /pmc/articles/PMC7927999/ /pubmed/33763547 http://dx.doi.org/10.1080/23802359.2021.1881928 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Gu, Ye
Ma, Qing
Lu, Yin
Characterization of the complete chloroplast genome of Farfugium japonicum (Asteraceae)
title Characterization of the complete chloroplast genome of Farfugium japonicum (Asteraceae)
title_full Characterization of the complete chloroplast genome of Farfugium japonicum (Asteraceae)
title_fullStr Characterization of the complete chloroplast genome of Farfugium japonicum (Asteraceae)
title_full_unstemmed Characterization of the complete chloroplast genome of Farfugium japonicum (Asteraceae)
title_short Characterization of the complete chloroplast genome of Farfugium japonicum (Asteraceae)
title_sort characterization of the complete chloroplast genome of farfugium japonicum (asteraceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7927999/
https://www.ncbi.nlm.nih.gov/pubmed/33763547
http://dx.doi.org/10.1080/23802359.2021.1881928
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