Chloroplast genome sequence of the wild Ziziphus jujuba Mill. var. spinosa from North China

In this study, the complete chloroplast (cp) genome sequence of Ziziphus jujuba Mill. var. spinosa was mapped and determined based on Illumina sequencing data. The complete cp genome is 161,606 bp and contains a pair of inverted repeat regions of 26,479 bp each, a large single-copy region of 89,292 ...

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Autores principales: Zhang, Yuping, Hu, Guanglong, Mao, Weitao, Dong, Ningguang, Chen, Bo, Pan, Qinghua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7928001/
https://www.ncbi.nlm.nih.gov/pubmed/33763543
http://dx.doi.org/10.1080/23802359.2021.1878962
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author Zhang, Yuping
Hu, Guanglong
Mao, Weitao
Dong, Ningguang
Chen, Bo
Pan, Qinghua
author_facet Zhang, Yuping
Hu, Guanglong
Mao, Weitao
Dong, Ningguang
Chen, Bo
Pan, Qinghua
author_sort Zhang, Yuping
collection PubMed
description In this study, the complete chloroplast (cp) genome sequence of Ziziphus jujuba Mill. var. spinosa was mapped and determined based on Illumina sequencing data. The complete cp genome is 161,606 bp and contains a pair of inverted repeat regions of 26,479 bp each, a large single-copy region of 89,292 bp, and a small single-copy region of 19,356 bp. It harbors 112 unique genes, including 78 protein-coding genes, 4 ribosomal RNA genes, and 30 transfer RNA genes. Phylogenetic analysis based on cp genomes indicates that the cp genome of wild Z. jujuba Mill. var. spinosa is similar to that of cultivated Z. jujuba and closely related to that of Z. incurva of the family Rhamnaceae.
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spelling pubmed-79280012021-03-23 Chloroplast genome sequence of the wild Ziziphus jujuba Mill. var. spinosa from North China Zhang, Yuping Hu, Guanglong Mao, Weitao Dong, Ningguang Chen, Bo Pan, Qinghua Mitochondrial DNA B Resour Mitogenome Announcement In this study, the complete chloroplast (cp) genome sequence of Ziziphus jujuba Mill. var. spinosa was mapped and determined based on Illumina sequencing data. The complete cp genome is 161,606 bp and contains a pair of inverted repeat regions of 26,479 bp each, a large single-copy region of 89,292 bp, and a small single-copy region of 19,356 bp. It harbors 112 unique genes, including 78 protein-coding genes, 4 ribosomal RNA genes, and 30 transfer RNA genes. Phylogenetic analysis based on cp genomes indicates that the cp genome of wild Z. jujuba Mill. var. spinosa is similar to that of cultivated Z. jujuba and closely related to that of Z. incurva of the family Rhamnaceae. Taylor & Francis 2021-03-01 /pmc/articles/PMC7928001/ /pubmed/33763543 http://dx.doi.org/10.1080/23802359.2021.1878962 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Yuping
Hu, Guanglong
Mao, Weitao
Dong, Ningguang
Chen, Bo
Pan, Qinghua
Chloroplast genome sequence of the wild Ziziphus jujuba Mill. var. spinosa from North China
title Chloroplast genome sequence of the wild Ziziphus jujuba Mill. var. spinosa from North China
title_full Chloroplast genome sequence of the wild Ziziphus jujuba Mill. var. spinosa from North China
title_fullStr Chloroplast genome sequence of the wild Ziziphus jujuba Mill. var. spinosa from North China
title_full_unstemmed Chloroplast genome sequence of the wild Ziziphus jujuba Mill. var. spinosa from North China
title_short Chloroplast genome sequence of the wild Ziziphus jujuba Mill. var. spinosa from North China
title_sort chloroplast genome sequence of the wild ziziphus jujuba mill. var. spinosa from north china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7928001/
https://www.ncbi.nlm.nih.gov/pubmed/33763543
http://dx.doi.org/10.1080/23802359.2021.1878962
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