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The complete mitochondrial genome of longlegged spiny lobster Panulirus longipes (A. Milne Edwards, 1868)
In this study, we first determined and characterized the complete mitochondrial genome of longlegged spiny lobster Panulirus longipes from South China Sea. The P. longipes mitogenome is 15,739 bp long, and consists of 22 tRNA genes, two rRNA genes, 13 protein-coding genes (PCGs), and one control reg...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7928049/ https://www.ncbi.nlm.nih.gov/pubmed/33763541 http://dx.doi.org/10.1080/23802359.2021.1878952 |
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author | Liu, Hongtao Pu, Liyun |
author_facet | Liu, Hongtao Pu, Liyun |
author_sort | Liu, Hongtao |
collection | PubMed |
description | In this study, we first determined and characterized the complete mitochondrial genome of longlegged spiny lobster Panulirus longipes from South China Sea. The P. longipes mitogenome is 15,739 bp long, and consists of 22 tRNA genes, two rRNA genes, 13 protein-coding genes (PCGs), and one control region. The nucleotide composition of P. longipes mitogenome is significantly biased (A, G, T, and C was 32.06%, 14.36%, 32.42%, and 21.16%, respectively) with A + T contents of 64.48%. Among 13 PCGs, COX1 gene used an unusual initiation codon CAA, COX1, COX2, ND4 and CYTB genes were ended with an incomplete stop codon T, and ND5 gene with an abnormal stop codon ATT. One microsatellite (C)(10) was identified in P. longipes mitogenome located in the control region. Phylogenetic tree showed that P. longipes was first clustered with Panulirus cygnus, then together with P. japonicus and P. argus. |
format | Online Article Text |
id | pubmed-7928049 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-79280492021-03-23 The complete mitochondrial genome of longlegged spiny lobster Panulirus longipes (A. Milne Edwards, 1868) Liu, Hongtao Pu, Liyun Mitochondrial DNA B Resour Mitogenome Announcement In this study, we first determined and characterized the complete mitochondrial genome of longlegged spiny lobster Panulirus longipes from South China Sea. The P. longipes mitogenome is 15,739 bp long, and consists of 22 tRNA genes, two rRNA genes, 13 protein-coding genes (PCGs), and one control region. The nucleotide composition of P. longipes mitogenome is significantly biased (A, G, T, and C was 32.06%, 14.36%, 32.42%, and 21.16%, respectively) with A + T contents of 64.48%. Among 13 PCGs, COX1 gene used an unusual initiation codon CAA, COX1, COX2, ND4 and CYTB genes were ended with an incomplete stop codon T, and ND5 gene with an abnormal stop codon ATT. One microsatellite (C)(10) was identified in P. longipes mitogenome located in the control region. Phylogenetic tree showed that P. longipes was first clustered with Panulirus cygnus, then together with P. japonicus and P. argus. Taylor & Francis 2021-03-01 /pmc/articles/PMC7928049/ /pubmed/33763541 http://dx.doi.org/10.1080/23802359.2021.1878952 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Liu, Hongtao Pu, Liyun The complete mitochondrial genome of longlegged spiny lobster Panulirus longipes (A. Milne Edwards, 1868) |
title | The complete mitochondrial genome of longlegged spiny lobster Panulirus longipes (A. Milne Edwards, 1868) |
title_full | The complete mitochondrial genome of longlegged spiny lobster Panulirus longipes (A. Milne Edwards, 1868) |
title_fullStr | The complete mitochondrial genome of longlegged spiny lobster Panulirus longipes (A. Milne Edwards, 1868) |
title_full_unstemmed | The complete mitochondrial genome of longlegged spiny lobster Panulirus longipes (A. Milne Edwards, 1868) |
title_short | The complete mitochondrial genome of longlegged spiny lobster Panulirus longipes (A. Milne Edwards, 1868) |
title_sort | complete mitochondrial genome of longlegged spiny lobster panulirus longipes (a. milne edwards, 1868) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7928049/ https://www.ncbi.nlm.nih.gov/pubmed/33763541 http://dx.doi.org/10.1080/23802359.2021.1878952 |
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