Complete plastid genome sequence of Oberonioides microtatantha (Schltr.) Szlach. (Orchidaceae), an endemic herb in China

The species Oberonioides microtatantha, belonging to the family Orchidaceae, is a small lithophytic herb endemic in south China with significant conservation values. The complete plastid genome sequence of O. microtatantha reported here is 144,989 bp in length, with a large single copy (LSC) region...

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Autores principales: Liu, Caiqin, Kang, Ning, Liu, Xin, Chen, Yu, Tao, Jun, Zhang, Yue, Zhang, Yanyan, Li, Yunlong, Tang, Guangda, Li, Yuling
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7928061/
https://www.ncbi.nlm.nih.gov/pubmed/33763556
http://dx.doi.org/10.1080/23802359.2020.1851150
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author Liu, Caiqin
Kang, Ning
Liu, Xin
Chen, Yu
Tao, Jun
Zhang, Yue
Zhang, Yanyan
Li, Yunlong
Tang, Guangda
Li, Yuling
author_facet Liu, Caiqin
Kang, Ning
Liu, Xin
Chen, Yu
Tao, Jun
Zhang, Yue
Zhang, Yanyan
Li, Yunlong
Tang, Guangda
Li, Yuling
author_sort Liu, Caiqin
collection PubMed
description The species Oberonioides microtatantha, belonging to the family Orchidaceae, is a small lithophytic herb endemic in south China with significant conservation values. The complete plastid genome sequence of O. microtatantha reported here is 144,989 bp in length, with a large single copy (LSC) region of 83,920 bp, a small single copy (SSC) region of 13,063 bp, and a pair of inverted repeat (IRa and IRb) regions of 24,003 bp each. The plastome consists of 95 genes, including 72 protein-coding genes, 4 ribosomal RNA genes, and 19 transfer RNA genes. The overall GC content is 36.81%. Phylogenetic analysis placed Oberonioides closet to the genus Liparis in Orchidaceae.
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spelling pubmed-79280612021-03-23 Complete plastid genome sequence of Oberonioides microtatantha (Schltr.) Szlach. (Orchidaceae), an endemic herb in China Liu, Caiqin Kang, Ning Liu, Xin Chen, Yu Tao, Jun Zhang, Yue Zhang, Yanyan Li, Yunlong Tang, Guangda Li, Yuling Mitochondrial DNA B Resour Mitogenome Announcement The species Oberonioides microtatantha, belonging to the family Orchidaceae, is a small lithophytic herb endemic in south China with significant conservation values. The complete plastid genome sequence of O. microtatantha reported here is 144,989 bp in length, with a large single copy (LSC) region of 83,920 bp, a small single copy (SSC) region of 13,063 bp, and a pair of inverted repeat (IRa and IRb) regions of 24,003 bp each. The plastome consists of 95 genes, including 72 protein-coding genes, 4 ribosomal RNA genes, and 19 transfer RNA genes. The overall GC content is 36.81%. Phylogenetic analysis placed Oberonioides closet to the genus Liparis in Orchidaceae. Taylor & Francis 2021-03-01 /pmc/articles/PMC7928061/ /pubmed/33763556 http://dx.doi.org/10.1080/23802359.2020.1851150 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Liu, Caiqin
Kang, Ning
Liu, Xin
Chen, Yu
Tao, Jun
Zhang, Yue
Zhang, Yanyan
Li, Yunlong
Tang, Guangda
Li, Yuling
Complete plastid genome sequence of Oberonioides microtatantha (Schltr.) Szlach. (Orchidaceae), an endemic herb in China
title Complete plastid genome sequence of Oberonioides microtatantha (Schltr.) Szlach. (Orchidaceae), an endemic herb in China
title_full Complete plastid genome sequence of Oberonioides microtatantha (Schltr.) Szlach. (Orchidaceae), an endemic herb in China
title_fullStr Complete plastid genome sequence of Oberonioides microtatantha (Schltr.) Szlach. (Orchidaceae), an endemic herb in China
title_full_unstemmed Complete plastid genome sequence of Oberonioides microtatantha (Schltr.) Szlach. (Orchidaceae), an endemic herb in China
title_short Complete plastid genome sequence of Oberonioides microtatantha (Schltr.) Szlach. (Orchidaceae), an endemic herb in China
title_sort complete plastid genome sequence of oberonioides microtatantha (schltr.) szlach. (orchidaceae), an endemic herb in china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7928061/
https://www.ncbi.nlm.nih.gov/pubmed/33763556
http://dx.doi.org/10.1080/23802359.2020.1851150
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