Cargando…

SARS-CoV-2 genomic analyses in cancer patients reveal elevated intrahost genetic diversity

Numerous factors have been identified to influence susceptibility to Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) infection and disease severity. Cancer patients are more prone to clinically evolve to more severe COVID-19 conditions, but the determinants of such a more severe outcome...

Descripción completa

Detalles Bibliográficos
Autores principales:	Siqueira, Juliana D, Goes, Livia R, Alves, Brunna M, de Carvalho, Pedro S, Cicala, Claudia, Arthos, James, Viola, João P B, de Melo, Andréia C, Soares, Marcelo A
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2021
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7928633/ https://www.ncbi.nlm.nih.gov/pubmed/33738124 http://dx.doi.org/10.1093/ve/veab013

Ejemplares similares

SARS-CoV-2 genomic and quasispecies analyses in cancer patients reveal relaxed intrahost virus evolution
por: Siqueira, Juliana D., et al.
Publicado: (2020)

Distinguishing SARS-CoV-2 bonafide re-infection from pre-existing minor variant reactivation
por: Siqueira, Juliana D., et al.
Publicado: (2021)

Evidence of recurrent selection of mutations commonly found in SARS-CoV-2 variants of concern in viruses infecting immunocompromised patients
por: Goes, Livia R., et al.
Publicado: (2022)

New infections by SARS-CoV-2 variants of concern after natural infections and post-vaccination in Rio de Janeiro, Brazil
por: Goes, Livia R., et al.
Publicado: (2021)

Measurements of intrahost viral diversity require an unbiased diversity metric
por: Zhao, Lei, et al.
Publicado: (2019)

Unusual SARS-CoV-2 intrahost diversity reveals lineage superinfection
por: Dezordi, Filipe Zimmer, et al.
Publicado: (2022)

Dengue Virus Serotype 2 Intrahost Diversity in Patients with Different Clinical Outcomes
por: Torres, Maria Celeste, et al.
Publicado: (2021)

An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar
por: Grubaugh, Nathan D., et al.
Publicado: (2019)

Intrahost Diversity of Feline Coronavirus: A Consensus between the Circulating Virulent/Avirulent Strains and the Internal Mutation Hypotheses?
por: Hora, Aline S., et al.
Publicado: (2013)

Vaccination has minimal impact on the intrahost diversity of H3N2 influenza viruses
por: Debbink, Kari, et al.
Publicado: (2017)

Intrahost evolution of the HIV-2 capsid correlates with progression to AIDS
por: Boswell, M T, et al.
Publicado: (2022)

Estimating HIV-1 Genetic Diversity in Brazil Through Next-Generation Sequencing
por: Alves, Brunna M., et al.
Publicado: (2019)

Rapid Intrahost Evolution of Human Cytomegalovirus Is Shaped by Demography and Positive Selection
por: Renzette, Nicholas, et al.
Publicado: (2013)

HAPHPIPE: Haplotype Reconstruction and Phylodynamics for Deep Sequencing of Intrahost Viral Populations
por: Bendall, Matthew L, et al.
Publicado: (2020)

Intrahost speciations and host switches played an important role in the evolution of herpesviruses
por: Brito, Anderson F, et al.
Publicado: (2021)

Impact of Intrahost NS5 Nucleotide Variations on Dengue Virus Replication
por: Cheng, Dayna, et al.
Publicado: (2022)

Sequential intrahost evolution and onward transmission of SARS-CoV-2 variants
por: Gonzalez-Reiche, Ana S., et al.
Publicado: (2023)

Low Intrahost and Interhost Genetic Diversity of Carnivore Protoparvovirus 1 in Domestic Cats during a Feline Panleukopenia Outbreak
por: Wang, Xiuwan, et al.
Publicado: (2022)

Deep-sequencing of viral genomes from a large and diverse cohort of treatment-naive HIV-infected persons shows associations between intrahost genetic diversity and viral load
por: Gabrielaite, Migle, et al.
Publicado: (2023)

High Resolution analysis of Transmission Dynamics of Sars-Cov-2 in Two Major Hospital Outbreaks in South Africa Leveraging Intrahost Diversity
por: James, San Emmanuel, et al.
Publicado: (2020)

HPV Induces Changes in Innate Immune and Adhesion Molecule Markers in Cervical Mucosa With Potential Impact on HIV Infection
por: Britto, Alan Messala A., et al.
Publicado: (2020)

Identification and characterization of diverse groups of endogenous retroviruses in felids
por: Mata, Helena, et al.
Publicado: (2015)

Dynamic Correlation between Intrahost HIV-1 Quasispecies Evolution and Disease Progression
por: Lee, Ha Youn, et al.
Publicado: (2008)

Poliovirus intrahost evolution is required to overcome tissue-specific innate immune responses
por: Xiao, Yinghong, et al.
Publicado: (2017)

Intrahost Monkeypox Virus Genome Variation in Patient with Early Infection, Finland, 2022
por: Vauhkonen, Hanna, et al.
Publicado: (2023)

Intrahost Genetic Diversity of Dengue Virus in Human Hosts and Mosquito Vectors under Natural Conditions Which Impact Replicative Fitness In Vitro
por: Nonyong, Patcharaporn, et al.
Publicado: (2023)

Calibration of an intrahost malaria model and parameter ensemble evaluation of a pre-erythrocytic vaccine
por: McCarthy, Kevin A, et al.
Publicado: (2015)

Intrahost Selection Pressures Drive Rapid Dengue Virus Microevolution in Acute Human Infections
por: Parameswaran, Poornima, et al.
Publicado: (2017)

Long-Term Intrahost Evolution of Staphylococcus aureus Among Diabetic Patients With Foot Infections
por: Lavigne, Jean-Philippe, et al.
Publicado: (2021)

Breakthrough Gastrointestinal COVID-19 and Intrahost Evolution Consequent to Combination Monoclonal Antibody Prophylaxis( )
por: Beddingfield, Brandon J, et al.
Publicado: (2022)

Characterization of HIV-1 Near Full-Length Proviral Genome Quasispecies from Patients with Undetectable Viral Load Undergoing First-Line HAART Therapy
por: Alves, Brunna M., et al.
Publicado: (2017)

HIV-1 envelope, integrins and co-receptor use in mucosal transmission of HIV
por: Cicala, Claudia, et al.
Publicado: (2011)

In Silico Analysis of Dengue Virus Serotype 2 Mutations Detected at the Intrahost Level in Patients with Different Clinical Outcomes
por: Torres, Maria Celeste, et al.
Publicado: (2021)

Longitudinal sampling is required to maximize detection of intrahost A/H3N2 virus variants
por: Koel, B F, et al.
Publicado: (2020)

A Three-Tiered Study of Differences in Murine Intrahost Immune Response to Multiple Pneumococcal Strains
por: Mochan-Keef, Ericka, et al.
Publicado: (2015)

Intrahost cytomegalovirus population genetics following antibody pretreatment in a monkey model of congenital transmission
por: Vera Cruz, Diana, et al.
Publicado: (2020)

Polymorphisms in the α4 Integrin of Neotropical Primates: Insights for Binding of Natural Ligands and HIV-1 gp120 to the Human α4β7
por: Darc, Mirela, et al.
Publicado: (2011)

ViralFlow: A Versatile Automated Workflow for SARS-CoV-2 Genome Assembly, Lineage Assignment, Mutations and Intrahost Variant Detection
por: Dezordi, Filipe Zimmer, et al.
Publicado: (2022)

Intrahost variations in the envelope receptor-binding domain (RBD) of HTLV-1 and STLV-1 primary isolates
por: Kim, Felix J, et al.
Publicado: (2006)

Examination of Geographical, Clinical and Intrahost Variations in the 3' Repeat Region of CagA Gene in Helicobacter pylori
por: Park, Soo Young, et al.
Publicado: (2010)

Cannot write session to /tmp/vufind_sessions/sess_mece6jeevrjv5ij4opok16sbqe