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Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework
BACKGROUND: Forecasting of COVID-19 cases daily and weekly has been one of the challenges posed to governments and the health sector globally. To facilitate informed public health decisions, the concerned parties rely on short-term daily projections generated via predictive modeling. We calibrate st...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7928884/ https://www.ncbi.nlm.nih.gov/pubmed/33604654 http://dx.doi.org/10.1093/gigascience/giab009 |
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author | Li, Qiwei Bedi, Tejasv Lehmann, Christoph U Xiao, Guanghua Xie, Yang |
author_facet | Li, Qiwei Bedi, Tejasv Lehmann, Christoph U Xiao, Guanghua Xie, Yang |
author_sort | Li, Qiwei |
collection | PubMed |
description | BACKGROUND: Forecasting of COVID-19 cases daily and weekly has been one of the challenges posed to governments and the health sector globally. To facilitate informed public health decisions, the concerned parties rely on short-term daily projections generated via predictive modeling. We calibrate stochastic variants of growth models and the standard susceptible-infectious-removed model into 1 Bayesian framework to evaluate and compare their short-term forecasts. RESULTS: We implement rolling-origin cross-validation to compare the short-term forecasting performance of the stochastic epidemiological models and an autoregressive moving average model across 20 countries that had the most confirmed COVID-19 cases as of August 22, 2020. CONCLUSION: None of the models proved to be a gold standard across all regions, while all outperformed the autoregressive moving average model in terms of the accuracy of forecast and interpretability. |
format | Online Article Text |
id | pubmed-7928884 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-79288842021-03-04 Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework Li, Qiwei Bedi, Tejasv Lehmann, Christoph U Xiao, Guanghua Xie, Yang Gigascience Research BACKGROUND: Forecasting of COVID-19 cases daily and weekly has been one of the challenges posed to governments and the health sector globally. To facilitate informed public health decisions, the concerned parties rely on short-term daily projections generated via predictive modeling. We calibrate stochastic variants of growth models and the standard susceptible-infectious-removed model into 1 Bayesian framework to evaluate and compare their short-term forecasts. RESULTS: We implement rolling-origin cross-validation to compare the short-term forecasting performance of the stochastic epidemiological models and an autoregressive moving average model across 20 countries that had the most confirmed COVID-19 cases as of August 22, 2020. CONCLUSION: None of the models proved to be a gold standard across all regions, while all outperformed the autoregressive moving average model in terms of the accuracy of forecast and interpretability. Oxford University Press 2021-02-19 /pmc/articles/PMC7928884/ /pubmed/33604654 http://dx.doi.org/10.1093/gigascience/giab009 Text en © The Author(s) 2021. Published by Oxford University Press GigaScience. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Li, Qiwei Bedi, Tejasv Lehmann, Christoph U Xiao, Guanghua Xie, Yang Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework |
title | Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework |
title_full | Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework |
title_fullStr | Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework |
title_full_unstemmed | Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework |
title_short | Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework |
title_sort | evaluating short-term forecasting of covid-19 cases among different epidemiological models under a bayesian framework |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7928884/ https://www.ncbi.nlm.nih.gov/pubmed/33604654 http://dx.doi.org/10.1093/gigascience/giab009 |
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