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Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework

BACKGROUND: Forecasting of COVID-19 cases daily and weekly has been one of the challenges posed to governments and the health sector globally. To facilitate informed public health decisions, the concerned parties rely on short-term daily projections generated via predictive modeling. We calibrate st...

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Autores principales: Li, Qiwei, Bedi, Tejasv, Lehmann, Christoph U, Xiao, Guanghua, Xie, Yang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7928884/
https://www.ncbi.nlm.nih.gov/pubmed/33604654
http://dx.doi.org/10.1093/gigascience/giab009
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author Li, Qiwei
Bedi, Tejasv
Lehmann, Christoph U
Xiao, Guanghua
Xie, Yang
author_facet Li, Qiwei
Bedi, Tejasv
Lehmann, Christoph U
Xiao, Guanghua
Xie, Yang
author_sort Li, Qiwei
collection PubMed
description BACKGROUND: Forecasting of COVID-19 cases daily and weekly has been one of the challenges posed to governments and the health sector globally. To facilitate informed public health decisions, the concerned parties rely on short-term daily projections generated via predictive modeling. We calibrate stochastic variants of growth models and the standard susceptible-infectious-removed model into 1 Bayesian framework to evaluate and compare their short-term forecasts. RESULTS: We implement rolling-origin cross-validation to compare the short-term forecasting performance of the stochastic epidemiological models and an autoregressive moving average model across 20 countries that had the most confirmed COVID-19 cases as of August 22, 2020. CONCLUSION: None of the models proved to be a gold standard across all regions, while all outperformed the autoregressive moving average model in terms of the accuracy of forecast and interpretability.
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spelling pubmed-79288842021-03-04 Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework Li, Qiwei Bedi, Tejasv Lehmann, Christoph U Xiao, Guanghua Xie, Yang Gigascience Research BACKGROUND: Forecasting of COVID-19 cases daily and weekly has been one of the challenges posed to governments and the health sector globally. To facilitate informed public health decisions, the concerned parties rely on short-term daily projections generated via predictive modeling. We calibrate stochastic variants of growth models and the standard susceptible-infectious-removed model into 1 Bayesian framework to evaluate and compare their short-term forecasts. RESULTS: We implement rolling-origin cross-validation to compare the short-term forecasting performance of the stochastic epidemiological models and an autoregressive moving average model across 20 countries that had the most confirmed COVID-19 cases as of August 22, 2020. CONCLUSION: None of the models proved to be a gold standard across all regions, while all outperformed the autoregressive moving average model in terms of the accuracy of forecast and interpretability. Oxford University Press 2021-02-19 /pmc/articles/PMC7928884/ /pubmed/33604654 http://dx.doi.org/10.1093/gigascience/giab009 Text en © The Author(s) 2021. Published by Oxford University Press GigaScience. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Li, Qiwei
Bedi, Tejasv
Lehmann, Christoph U
Xiao, Guanghua
Xie, Yang
Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework
title Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework
title_full Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework
title_fullStr Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework
title_full_unstemmed Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework
title_short Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework
title_sort evaluating short-term forecasting of covid-19 cases among different epidemiological models under a bayesian framework
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7928884/
https://www.ncbi.nlm.nih.gov/pubmed/33604654
http://dx.doi.org/10.1093/gigascience/giab009
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