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Changes in gastric mucosal microbiota in gastric carcinogenesis: a systematic review protocol
INTRODUCTION: The human stomach is a complex and diverse microbial ecosystem. Consecutive alternations of gastric microbiota occur in gastric carcinogenesis, while the changing pattern during this process remains controversial across studies. We aim to identify the changes in the diversity and compo...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BMJ Publishing Group
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7929888/ https://www.ncbi.nlm.nih.gov/pubmed/33653765 http://dx.doi.org/10.1136/bmjopen-2020-045810 |
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author | Ji, Ruoyu Zhao, Xinyu Cao, Xinyuan Zhang, Yizhen Yang, Yingyun |
author_facet | Ji, Ruoyu Zhao, Xinyu Cao, Xinyuan Zhang, Yizhen Yang, Yingyun |
author_sort | Ji, Ruoyu |
collection | PubMed |
description | INTRODUCTION: The human stomach is a complex and diverse microbial ecosystem. Consecutive alternations of gastric microbiota occur in gastric carcinogenesis, while the changing pattern during this process remains controversial across studies. We aim to identify the changes in the diversity and composition of gastric mucosal microbiota in gastric tumorigenesis. METHODS AND ANALYSIS: We will search through PubMed, EMBASE and Cochrane databases, as well as conference proceedings and references of review articles for observational articles reporting either the relative abundance of bacteria at the phylum or genus level or at least one of the alpha diversity indexes respectively and clearly in both gastric cancer and non-cancer groups. Selection of studies and data extraction will be performed independently by two researchers. Disagreements will be resolved through discussion. Risk of bias will be assessed using the modified Newcastle-Ottawa Scale. Quantitative analyses will be performed using a random effects model, where the effect measurement will be expressed as the MD. ETHICS AND DISSEMINATION: Ethical approval for this systematic review is not required, as the study is based exclusively on published documents and will not include any individual data. Findings of this study are expected to be disseminated through peer-reviewed journals or conference proceedings. PROSPERO REGISTRATION NUMBER: CRD42020206973. |
format | Online Article Text |
id | pubmed-7929888 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BMJ Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-79298882021-03-19 Changes in gastric mucosal microbiota in gastric carcinogenesis: a systematic review protocol Ji, Ruoyu Zhao, Xinyu Cao, Xinyuan Zhang, Yizhen Yang, Yingyun BMJ Open Gastroenterology and Hepatology INTRODUCTION: The human stomach is a complex and diverse microbial ecosystem. Consecutive alternations of gastric microbiota occur in gastric carcinogenesis, while the changing pattern during this process remains controversial across studies. We aim to identify the changes in the diversity and composition of gastric mucosal microbiota in gastric tumorigenesis. METHODS AND ANALYSIS: We will search through PubMed, EMBASE and Cochrane databases, as well as conference proceedings and references of review articles for observational articles reporting either the relative abundance of bacteria at the phylum or genus level or at least one of the alpha diversity indexes respectively and clearly in both gastric cancer and non-cancer groups. Selection of studies and data extraction will be performed independently by two researchers. Disagreements will be resolved through discussion. Risk of bias will be assessed using the modified Newcastle-Ottawa Scale. Quantitative analyses will be performed using a random effects model, where the effect measurement will be expressed as the MD. ETHICS AND DISSEMINATION: Ethical approval for this systematic review is not required, as the study is based exclusively on published documents and will not include any individual data. Findings of this study are expected to be disseminated through peer-reviewed journals or conference proceedings. PROSPERO REGISTRATION NUMBER: CRD42020206973. BMJ Publishing Group 2021-03-02 /pmc/articles/PMC7929888/ /pubmed/33653765 http://dx.doi.org/10.1136/bmjopen-2020-045810 Text en © Author(s) (or their employer(s)) 2021. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ. http://creativecommons.org/licenses/by-nc/4.0/ http://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited, appropriate credit is given, any changes made indicated, and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/4.0/. |
spellingShingle | Gastroenterology and Hepatology Ji, Ruoyu Zhao, Xinyu Cao, Xinyuan Zhang, Yizhen Yang, Yingyun Changes in gastric mucosal microbiota in gastric carcinogenesis: a systematic review protocol |
title | Changes in gastric mucosal microbiota in gastric carcinogenesis: a systematic review protocol |
title_full | Changes in gastric mucosal microbiota in gastric carcinogenesis: a systematic review protocol |
title_fullStr | Changes in gastric mucosal microbiota in gastric carcinogenesis: a systematic review protocol |
title_full_unstemmed | Changes in gastric mucosal microbiota in gastric carcinogenesis: a systematic review protocol |
title_short | Changes in gastric mucosal microbiota in gastric carcinogenesis: a systematic review protocol |
title_sort | changes in gastric mucosal microbiota in gastric carcinogenesis: a systematic review protocol |
topic | Gastroenterology and Hepatology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7929888/ https://www.ncbi.nlm.nih.gov/pubmed/33653765 http://dx.doi.org/10.1136/bmjopen-2020-045810 |
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